RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 EPHX3Q9H6B9 360 aa9.55□□□□□ -0.88
SNF8-211ENST00000512243 SUN2Q9UH99 717 aa9.55□□□□□ -0.88
SNF8-211ENST00000512243 R3HDM2Q9Y2K5 976 aaKnown RBP9.55□□□□□ -0.88
SNF8-211ENST00000512243 ACTL7AQ9Y615 435 aa9.55□□□□□ -0.88
SNF8-211ENST00000512243 AK5Q9Y6K8 562 aa9.55□□□□□ -0.88
SNF8-211ENST00000512243 ZNF318Q5VUA4 2279 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 TARSL2A2RTX5 802 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 CFAP69A5D8W1 941 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 FAM86C2PA6NEL3 165 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 ANTXRLA6NF34 631 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 CHURC1-FNTBB4DL54 471 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 K7ERQ8 282 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 SGK1O00141 431 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 SMAD6O43541 496 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 LIASO43766 372 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 STK10O94804 968 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 CD160O95971 181 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 GSRP00390 522 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 CD8BP10966 210 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 CCNB1P14635 433 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 HSPA9P38646 679 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 MMP13P45452 471 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 RENBPP51606 427 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 SNRPD1P62314 119 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 IFI35P80217 286 aaPredicted RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 FZD5Q13467 585 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 ENPP2Q13822 863 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 HNRNPDQ14103 355 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 SIX1Q15475 284 aaPredicted RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 HNRNPA1L2Q32P51 320 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 MARC1Q5VT66 337 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 PKN3Q6P5Z2 889 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 B4GALNT4Q76KP1 1039 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 ARMCX6Q7L4S7 300 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 BMP8AQ7Z5Y6 402 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 SPEM1Q8N4L4 309 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 FRS2Q8WU20 508 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 C1orf54Q8WWF1 131 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 OR8D1Q8WZ84 308 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 MAML1Q92585 1016 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 ISG20Q96AZ6 181 aaKnown RBP9.54□□□□□ -0.88
SNF8-211ENST00000512243 MISP3Q96FF7 219 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 GDAP1L1Q96MZ0 367 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 TM6SF2Q9BZW4 377 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 TNKS2Q9H2K2 1166 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 FBRSQ9HAH7 460 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 NT5MQ9NPB1 228 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 HOMER3Q9NSC5 361 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 SMARCAL1Q9NZC9 954 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 RNF14Q9UBS8 474 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 SLCO3A1Q9UIG8 710 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 DNPEPQ9ULA0 475 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 TTLL3Q9Y4R7 772 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 PLXND1Q9Y4D7 1925 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 SPAG17Q6Q759 2223 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 EML5Q05BV3 1969 aa9.54□□□□□ -0.88
SNF8-211ENST00000512243 BCLAF3A2AJT9 711 aaKnown RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 WASH3PC4AMC7 463 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 KCNK1O00180 336 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 RNF103O00237 685 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 KRIT1O00522 736 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 KCNN4O15554 427 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 URI1O94763 535 aaPredicted RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 ALDH1A2O94788 518 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 PEX11BO96011 259 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 RBL1P28749 1068 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 CCR3P51677 355 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 RAD51Q06609 339 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 CKAP4Q07065 602 aaKnown RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 SLC10A7Q0GE19 358 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 ZBTB17Q13105 803 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 SNX1Q13596 522 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 BYSLQ13895 437 aaKnown RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 SEPT6Q14141 434 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 ELAVL3Q14576 367 aaKnown RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 CYTH1Q15438 398 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 CCNG2Q16589 344 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 WIPI1Q5MNZ9 446 aaPredicted RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 SYT13Q7L8C5 426 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 CREG2Q8IUH2 290 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 RYBPQ8N488 228 aaPredicted RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 TEX26Q8N6G2 289 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 SLC35B2Q8TB61 432 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 HTR3CQ8WXA8 447 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 NKD2Q969F2 451 aaPredicted RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 ERLEC1Q96DZ1 483 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 EXOC2Q96KP1 924 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 MGME1Q9BQP7 344 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 AP1M1Q9BXS5 423 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 RBM22Q9NW64 420 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNF8-211ENST00000512243 SPATA6Q9NWH7 488 aaPredicted RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 KLHL8Q9P2G9 620 aaPredicted RBP9.53□□□□□ -0.88
SNF8-211ENST00000512243 LHX3Q9UBR4 397 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 AMACRQ9UHK6 382 aa9.53□□□□□ -0.88
SNF8-211ENST00000512243 NUMA1Q14980 2115 aa9.52□□□□□ -0.89
SNF8-211ENST00000512243 TCRBV21S2A2A0A5A6 115 aa9.52□□□□□ -0.89
SNF8-211ENST00000512243 C1QTNF3-AMACRE9PGA6 284 aa9.52□□□□□ -0.89
SNF8-211ENST00000512243 ALOX15BO15296 676 aa9.52□□□□□ -0.89
SNF8-211ENST00000512243 PI15O43692 258 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms