RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PRSS38A1L453 326 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 PRR19A6NJB7 356 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 TNFRSF10CO14798 259 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 PPM1DO15297 605 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 RECQL5O94762 991 aaPredicted RBP19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 ECEL1O95672 775 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 THRAP10827 490 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 XPAP23025 273 aaPredicted RBP19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 AK4P27144 223 aaPredicted RBP19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 TRIM23P36406 574 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 CDO1Q16878 200 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 DEFB109BQ30KR1 87 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 PHLDB2Q86SQ0 1253 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 FAM71AQ8IYT1 594 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 TMEM35BQ8NCS4 154 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 ZDHHC1Q8WTX9 485 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 FAM81BQ96LP2 452 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 SUV39H2Q9H5I1 410 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 SUDS3Q9H7L9 328 aaPredicted RBP19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 SLC39A1Q9NY26 324 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 KCNK4Q9NYG8 393 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 DNAJC12Q9UKB3 198 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 ATP8A1Q9Y2Q0 1164 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 SHANK1Q9Y566 2161 aa19.08■□□□□ 0.64
HMGCS1-206ENST00000511774 BICDL2A1A5D9 508 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 RHPN2P1A8MT19 583 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 CACNB4O00305 520 aaPredicted RBP19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 BIN1O00499 593 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 PLEKP08567 350 aaPredicted RBP19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 KRT7P08729 469 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 CCNB1P14635 433 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 RGRP47804 291 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 SUOXP51687 545 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 EXOC3L4Q17RC7 722 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 CCDC14Q49A88 953 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 LACTB2Q53H82 288 aaPredicted RBP19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 INO80DQ53TQ3 878 aaPredicted RBP19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 TAF3Q5VWG9 929 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 GBP6Q6ZN66 633 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 CAMK1DQ8IU85 385 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 PYROXD2Q8N2H3 581 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 AGBL5Q8NDL9 886 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 TBC1D31Q96DN5 1066 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 METTL5Q9NRN9 209 aaKnown RBP19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 TAAR2Q9P1P5 351 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 MOSPD1Q9UJG1 213 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 MED13Q9UHV7 2174 aa19.07■□□□□ 0.64
HMGCS1-206ENST00000511774 IGHV1OR21-1A0A087WYE8 117 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 ZSCAN5CA6NGD5 496 aaPredicted RBP19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 EFCAB7A8K855 629 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 HOXC4P09017 264 aaPredicted RBP19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 PAK1Q13153 545 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 LIPIQ6XZB0 460 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 ZNF354CQ86Y25 554 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 NAGSQ8N159 534 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 OR4D9Q8NGE8 314 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 KIAA1524Q8TCG1 905 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 GPT2Q8TD30 523 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 HCAR2Q8TDS4 363 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 RTP4Q96DX8 246 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 NSMCE3Q96MG7 304 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 CTRCQ99895 268 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 NCAPGQ9BPX3 1015 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 GPN2Q9H9Y4 310 aaPredicted RBP19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 TNRC6AQ8NDV7 1962 aaKnown RBP19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 ESPL1Q14674 2120 aa19.06■□□□□ 0.64
HMGCS1-206ENST00000511774 DOPEY1Q5JWR5 2465 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 PPP1R2P41236 205 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 TRA2AQ13595 282 aaKnown RBP eCLIP19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 ERAP2Q6P179 960 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 FAM129CQ86XR2 697 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 JOSD2Q8TAC2 188 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 APOBEC4Q8WW27 367 aaKnown RBP19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 RXFP2Q8WXD0 754 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 CASKIN2Q8WXE0 1202 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 CPA5Q8WXQ8 436 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 TIGD1Q96MW7 591 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 RETREG1Q9H6L5 497 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 CARS2Q9HA77 564 aaKnown RBP19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 TMEM51Q9NW97 253 aa19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 MRPS18BQ9Y676 258 aaKnown RBP19.05■□□□□ 0.64
HMGCS1-206ENST00000511774 B4E171 279 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 RASA4BC9J798 803 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 TEX33O43247 280 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 RASA4O43374 803 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 CEACAM5P06731 702 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 CYP11B1P15538 503 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 F8A1P23610 371 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 CSTF2P33240 577 aaKnown RBP eCLIP19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 TSPAN7P41732 249 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 HDAC4P56524 1084 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 KLRB1Q12918 225 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 SQSTM1Q13501 440 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 CLPPQ16740 277 aaPredicted RBP19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 ARCQ7LC44 396 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 DNAAF5Q86Y56 855 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 RTL3Q8N8U3 475 aaKnown RBP19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 RNF31Q96EP0 1072 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 WDR26Q9H7D7 661 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 PDFQ9HBH1 243 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms