RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GLMNQ92990 594 aa23.04■■□□□ 1.28
SNF8-209ENST00000510558 CCDC42Q96M95 316 aa23.04■■□□□ 1.28
SNF8-209ENST00000510558 NHEJ1Q9H9Q4 299 aaPredicted RBP23.04■■□□□ 1.28
SNF8-209ENST00000510558 PHTF1Q9UMS5 762 aa23.04■■□□□ 1.28
SNF8-209ENST00000510558 AK5Q9Y6K8 562 aa23.04■■□□□ 1.28
SNF8-209ENST00000510558 COL27A1Q8IZC6 1860 aaPredicted RBP23.03■■□□□ 1.28
SNF8-209ENST00000510558 EME2A4GXA9 379 aaPredicted RBP23.03■■□□□ 1.28
SNF8-209ENST00000510558 CTSEP14091 401 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 NFKBIAP25963 317 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 KIAA1024LP59773 190 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 SRP54P61011 504 aaKnown RBP23.03■■□□□ 1.28
SNF8-209ENST00000510558 ELOCQ15369 112 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 CNGA3Q16281 694 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 ZFYVE27Q5T4F4 411 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 TIGD7Q6NT04 549 aaPredicted RBP23.03■■□□□ 1.28
SNF8-209ENST00000510558 EFL1Q7Z2Z2 1120 aaKnown RBP23.03■■□□□ 1.28
SNF8-209ENST00000510558 SLC35F3Q8IY50 421 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 SLC35G2Q8TBE7 412 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 MAML1Q92585 1016 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 FUBP1Q96AE4 644 aaKnown RBP23.03■■□□□ 1.28
SNF8-209ENST00000510558 COQ10AQ96MF6 247 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 SEMA3CQ99985 751 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 ABCG4Q9H172 646 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 DOLKQ9UPQ8 538 aa23.03■■□□□ 1.28
SNF8-209ENST00000510558 CACNB4O00305 520 aaPredicted RBP23.02■■□□□ 1.28
SNF8-209ENST00000510558 HEXIM1O94992 359 aaKnown RBP23.02■■□□□ 1.28
SNF8-209ENST00000510558 PGLSO95336 258 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 ALPIP09923 528 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 CYP2A6P11509 494 aaPredicted RBP23.02■■□□□ 1.28
SNF8-209ENST00000510558 RPIAP49247 311 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 ITKQ08881 620 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 TCEA2Q15560 299 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 IFI16Q16666 785 aaKnown RBP23.02■■□□□ 1.28
SNF8-209ENST00000510558 ARMC12Q5T9G4 340 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 KCTD16Q68DU8 428 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 ESRP1Q6NXG1 681 aaKnown RBP23.02■■□□□ 1.28
SNF8-209ENST00000510558 PQLC3Q8N755 202 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 NUS1Q96E22 293 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 PDXPQ96GD0 296 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 TSGA13Q96PP4 275 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 DEPDC7Q96QD5 511 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 POLR1EQ9GZS1 481 aaKnown RBP23.02■■□□□ 1.28
SNF8-209ENST00000510558 LHX6Q9UPM6 363 aa23.02■■□□□ 1.28
SNF8-209ENST00000510558 MATN3O15232 486 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 LHCGRP22888 699 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 CCNCP24863 283 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 TRIM23P36406 574 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 GBE1Q04446 702 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 DENND2CQ68D51 928 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 PNCKQ6P2M8 343 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 C19orf48Q6RUI8 117 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 CNGA4Q8IV77 575 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 RHOT2Q8IXI1 618 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 PELI3Q8N2H9 469 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 OR56A4Q8NGH8 313 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 OR1E3Q8WZA6 343 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 RAPGEF5Q92565 580 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 FATE1Q969F0 183 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 PCDHB1Q9Y5F3 818 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 RAI2Q9Y5P3 530 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 DGKBQ9Y6T7 804 aa23.01■■□□□ 1.27
SNF8-209ENST00000510558 DSPP15924 2871 aaKnown RBP23.01■■□□□ 1.27
SNF8-209ENST00000510558 TMEM202A6NGA9 273 aa23■■□□□ 1.27
SNF8-209ENST00000510558 NPIPB15A6NHN6 443 aaPredicted RBP23■■□□□ 1.27
SNF8-209ENST00000510558 TNFP01375 233 aa23■■□□□ 1.27
SNF8-209ENST00000510558 HOXC4P09017 264 aaPredicted RBP23■■□□□ 1.27
SNF8-209ENST00000510558 TGM2P21980 687 aa23■■□□□ 1.27
SNF8-209ENST00000510558 KELP23276 732 aa23■■□□□ 1.27
SNF8-209ENST00000510558 KDELR1P24390 212 aa23■■□□□ 1.27
SNF8-209ENST00000510558 PERM1Q5SV97 790 aa23■■□□□ 1.27
SNF8-209ENST00000510558 ALG1LQ6GMV1 187 aa23■■□□□ 1.27
SNF8-209ENST00000510558 LVRNQ6Q4G3 990 aa23■■□□□ 1.27
SNF8-209ENST00000510558 USP45Q70EL2 814 aa23■■□□□ 1.27
SNF8-209ENST00000510558 GKN2Q86XP6 184 aa23■■□□□ 1.27
SNF8-209ENST00000510558 SDR16C5Q8N3Y7 309 aa23■■□□□ 1.27
SNF8-209ENST00000510558 LRRN4Q8WUT4 740 aa23■■□□□ 1.27
SNF8-209ENST00000510558 PIH1D2Q8WWB5 315 aa23■■□□□ 1.27
SNF8-209ENST00000510558 SCG3Q8WXD2 468 aaKnown RBP23■■□□□ 1.27
SNF8-209ENST00000510558 NAT6Q93015 286 aa23■■□□□ 1.27
SNF8-209ENST00000510558 SCRN2Q96FV2 425 aa23■■□□□ 1.27
SNF8-209ENST00000510558 RNF157Q96PX1 679 aa23■■□□□ 1.27
SNF8-209ENST00000510558 MCCC1Q96RQ3 725 aaPredicted RBP23■■□□□ 1.27
SNF8-209ENST00000510558 WDR26Q9H7D7 661 aa23■■□□□ 1.27
SNF8-209ENST00000510558 FGF22Q9HCT0 170 aa23■■□□□ 1.27
SNF8-209ENST00000510558 RBM22Q9NW64 420 aaKnown RBP eCLIP23■■□□□ 1.27
SNF8-209ENST00000510558 KCTD5Q9NXV2 234 aa23■■□□□ 1.27
SNF8-209ENST00000510558 LRRD1A4D1F6 860 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 AKR1B15C9JRZ8 316 aaPredicted RBP22.99■■□□□ 1.27
SNF8-209ENST00000510558 PSMD11O00231 422 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 FZD6O60353 706 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 CSO75390 466 aaKnown RBP22.99■■□□□ 1.27
SNF8-209ENST00000510558 MTA2O94776 668 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 PDHA1P08559 390 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 CTPS1P17812 591 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 MX2P20592 715 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 ARHGAP25P42331 645 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 DSC2Q02487 901 aa22.99■■□□□ 1.27
SNF8-209ENST00000510558 SLC10A2Q12908 348 aaPredicted RBP22.99■■□□□ 1.27
SNF8-209ENST00000510558 TBX2Q13207 712 aaPredicted RBP22.99■■□□□ 1.27
SNF8-209ENST00000510558 ARHGEF7Q14155 803 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms