RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MATN3O15232 486 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CASC3O15234 703 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ARHGAP6O43182 974 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CST8O60676 142 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 RNASEH1O60930 286 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 SOD1P00441 154 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 C1SP09871 688 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ALPIP09923 528 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 GIMD1P0DJR0 217 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 C6P13671 934 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 DESP17661 470 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 PTPN3P26045 913 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CA5AP35218 305 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 SERPINB6P35237 376 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 MMP13P45452 471 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 GEMIN4P57678 1058 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 GSDMDP57764 484 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 AP1S1P61966 158 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CBLBQ13191 982 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 OLIG2Q13516 323 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 BYSLQ13895 437 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF235Q14590 738 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 RFTN1Q14699 578 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 IRF4Q15306 451 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 E2F5Q15329 346 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CNGA3Q16281 694 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CDKN3Q16667 212 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 DUOXA1Q1HG43 343 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF423Q2M1K9 1284 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 TMEM52BQ4KMG9 183 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 AASDHQ4L235 1098 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 FAM46CQ5VWP2 391 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 KAZNQ674X7 775 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 KDELC1Q6UW63 502 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ABI3BPQ7Z7G0 1075 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 KIAA1328Q86T90 577 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 REXO1L1PQ8IX06 675 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CCDC13Q8IYE1 715 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 PLA2G15Q8NCC3 412 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 EXD1Q8NHP7 514 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 BAHD1Q8TBE0 780 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 NETO1Q8TDF5 533 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 PIH1D2Q8WWB5 315 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 EID2BQ96D98 161 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 OXNAD1Q96HP4 312 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 MCCC1Q96RQ3 725 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 WDR24Q96S15 920 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 PPP1R9BQ96SB3 815 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 SEMA3CQ99985 751 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 WRAP53Q9BUR4 548 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 MLPHQ9BV36 600 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 CPEB1Q9BZB8 566 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 TCEAL2Q9H3H9 227 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 SUV39H2Q9H5I1 410 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 B4GALT6Q9UBX8 382 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 LCMT1Q9UIC8 334 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 KLF15Q9UIH9 416 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 HEY1Q9Y5J3 304 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 PCYT1BQ9Y5K3 369 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF106Q9H2Y7 1883 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ZZEF1O43149 2961 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ZFHX4Q86UP3 3567 aa7.25□□□□□ -1.25
TOPBP1-207ENST00000509162 ARID1BQ8NFD5 2236 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 GOLGA6L3A6NEY3 463 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 LRRC72A6NJI9 287 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 KHNYNO15037 678 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 VILLO15195 856 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC31A1O15431 190 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 MMP20O60882 483 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CBFA2T3O75081 653 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 PGLSO95336 258 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 POP4O95707 220 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 TOP3BO95985 862 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CPP00450 1065 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 JCHAINP01591 159 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 ATXN1LP0C7T5 689 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CTPS1P17812 591 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 NFKB1P19838 968 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CCNCP24863 283 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 RECQLP46063 649 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 SCNN1BP51168 640 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 PFN3P60673 137 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 OTUD4Q01804 1114 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CLN3Q13286 438 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 HNRNPDQ14103 355 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 IFI16Q16666 785 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 UGP2Q16851 508 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 WSCD2Q2TBF2 565 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 WDR45BQ5MNZ6 344 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 KYAT3Q6YP21 454 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF662Q6ZS27 426 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 DPPA4Q7L190 304 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 HSD11B1LQ7Z5J1 315 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CBARPQ8N350 705 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 C12orf50Q8NA57 414 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 SPATA22Q8NHS9 363 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 ATG4AQ8WYN0 398 aa7.24□□□□□ -1.25
TOPBP1-207ENST00000509162 CENPTQ96BT3 561 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms