RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 BRF2Q9HAW0 419 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 TXNRD2Q9NNW7 524 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 KRCC1Q9NPI7 259 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 FSCN3Q9NQT6 498 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 GIMAP4Q9NUV9 329 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 BEX4Q9NWD9 120 aaPredicted RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 KCND2Q9NZV8 630 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 CWC15Q9P013 229 aaKnown RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 KCNG2Q9UJ96 466 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 HOOK1Q9UJC3 728 aaKnown RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 DAPP1Q9UN19 280 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PPIEQ9UNP9 301 aaKnown RBP2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 OSGIN2Q9Y236 505 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 DNAJC16Q9Y2G8 782 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PCDHGB1Q9Y5G3 927 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PTGDR2Q9Y5Y4 395 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 PSAT1Q9Y617 370 aa2.49□□□□□ -2.01
DEPDC1B-204ENST00000509006 FLT1P17948 1338 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 LOC100509620A0A075B734 347 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 C17orf113A0A1B0GUU1 675 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 CCDC69A6NI79 296 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SRRM3A6NNA2 597 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 STX16-NPEPL1H3BU86 382 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 J3KTA2 159 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 DDX39AO00148 427 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 CHL1O00533 1208 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 MPHOSPH10O00566 681 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 UBE2CO00762 179 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SH2B2O14492 632 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 STX16O14662 325 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 NDC80O14777 642 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 PCDH17O14917 1159 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 LDB3O75112 727 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ERAL1O75616 437 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 TGDSO95455 350 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 GGPS1O95749 300 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 MLYCDO95822 493 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ATP5BP06576 529 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ADRB2P07550 413 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 MYBL1P10243 752 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ARSBP15848 533 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 IGFBP2P18065 325 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 EPHA8P29322 1005 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 GCH1P30793 250 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 TCF7P36402 384 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 HARS2P49590 506 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 CTCFP49711 727 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ALDH3A2P51648 485 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ZNF41P51814 821 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ART1P52961 327 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 RAD23AP54725 363 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 CDH15P55291 814 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SELENOVP59797 346 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ERVFC1-1P60608 527 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 PPARDQ03181 441 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SF3A3Q12874 501 aaKnown RBP eCLIP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 PTP4A2Q12974 167 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 DCTN2Q13561 401 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 CBFBQ13951 182 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 TNIP1Q15025 636 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 KYNUQ16719 465 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 MRGPRG-AS1Q2M3A8 158 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 C15orf59Q2T9L4 293 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 LRRC24Q50LG9 513 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 BMP2KLQ5H9B9 411 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 FAM76BQ5HYJ3 339 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 C9orf152Q5JTZ5 239 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 GARNL3Q5VVW2 1013 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 C9orf57Q5W0N0 161 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SLC22A25Q6T423 547 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SLC16A12Q6ZSM3 486 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 Q6ZTK2 550 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SYT13Q7L8C5 426 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 C16orf82Q7Z2V1 217 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ARMC9Q7Z3E5 817 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 GALNT7Q86SF2 657 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ADGRG6Q86SQ4 1221 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 RPAINQ86UA6 219 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 TRABD2AQ86V40 505 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 DNAAF5Q86Y56 855 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 CCDC170Q8IYT3 715 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 CARNMT1Q8N4J0 409 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 SYT2Q8N9I0 419 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ENGASEQ8NFI3 743 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 RFWD2Q8NHY2 731 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 GABPB2Q8TAK5 448 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 NEK9Q8TD19 979 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ADAMTS14Q8WXS8 1223 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 TAF4BQ92750 862 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ARHGEF2Q92974 986 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 MOAP1Q96BY2 351 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 RMDN1Q96DB5 314 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 KTI12Q96EK9 354 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 RBM17Q96I25 401 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 REXO5Q96IC2 774 aaKnown RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 FAR2Q96K12 515 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 WDR77Q9BQA1 342 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 ANP32EQ9BTT0 268 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 FSD1Q9BTV5 496 aa2.48□□□□□ -2.01
DEPDC1B-204ENST00000509006 TM6SF1Q9BZW5 370 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms