RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ACOX1Q15067 660 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 CNGA3Q16281 694 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 PROX2Q3B8N5 592 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 SLCO6A1Q86UG4 719 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 CCDC50Q8IVM0 306 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 SYCE1Q8N0S2 351 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 FSTL5Q8N475 847 aaPredicted RBP19.93■□□□□ 0.78
SFXN1-209ENST00000508290 CHCHD4Q8N4Q1 142 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 ZNF548Q8NEK5 533 aaPredicted RBP19.93■□□□□ 0.78
SFXN1-209ENST00000508290 ARRDC2Q8TBH0 407 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 PIH1D2Q8WWB5 315 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 P3H4Q92791 437 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 COQ10AQ96MF6 247 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 APOOQ9BUR5 198 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 ADGRE3Q9BY15 652 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 APOBEC3BQ9UH17 382 aaKnown RBP19.93■□□□□ 0.78
SFXN1-209ENST00000508290 COQ6Q9Y2Z9 468 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 PCDHA3Q9Y5H8 950 aa19.93■□□□□ 0.78
SFXN1-209ENST00000508290 hCG_1818297A0A087WSY0 165 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 A0A0J9YYE9 177 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 TTC24A2A3L6 582 aaPredicted RBP19.92■□□□□ 0.78
SFXN1-209ENST00000508290 KCNK1O00180 336 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 AQP9O43315 295 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 CST8O60676 142 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 RFPL3O75679 317 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 RASGRP1O95267 797 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 TRBC1P01850 177 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 PRKCGP05129 697 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 PYGLP06737 847 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 TSHRP16473 764 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 ACP1P24666 158 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 TEAD1P28347 426 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 ACADVLP49748 655 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 DSC2Q02487 901 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 ZCCHC8Q6NZY4 707 aaKnown RBP19.92■□□□□ 0.78
SFXN1-209ENST00000508290 TMPRSS7Q7RTY8 843 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 TMEM139Q8IV31 216 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 PHACTR4Q8IZ21 702 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 CBARPQ8N350 705 aaPredicted RBP19.92■□□□□ 0.78
SFXN1-209ENST00000508290 TFB1MQ8WVM0 346 aaKnown RBP19.92■□□□□ 0.78
SFXN1-209ENST00000508290 NUS1Q96E22 293 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 LYSMD1Q96S90 227 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 VAT1Q99536 393 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 FERMT1Q9BQL6 677 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 REXO2Q9Y3B8 237 aaKnown RBP19.92■□□□□ 0.78
SFXN1-209ENST00000508290 CEP295Q9C0D2 2601 aa19.92■□□□□ 0.78
SFXN1-209ENST00000508290 CAPN8A6NHC0 703 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 HACD1B0YJ81 288 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 TNFRSF10CO14798 259 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 SIGLEC6O43699 453 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 PCCBP05166 539 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 PTPN7P35236 360 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 TRIM23P36406 574 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 DYNLT1P63172 113 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 EIF2B5Q13144 721 aaKnown RBP19.91■□□□□ 0.78
SFXN1-209ENST00000508290 PRKD1Q15139 912 aaPredicted RBP19.91■□□□□ 0.78
SFXN1-209ENST00000508290 SMAD1Q15797 465 aaKnown RBP19.91■□□□□ 0.78
SFXN1-209ENST00000508290 NLRP8Q86W28 1048 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 PNPLA1Q8N8W4 532 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 GLMNQ92990 594 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 DTD2Q96FN9 168 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 WDR92Q96MX6 357 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 SRPK1Q96SB4 655 aaKnown RBP19.91■□□□□ 0.78
SFXN1-209ENST00000508290 GOLPH3Q9H4A6 298 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 WDR26Q9H7D7 661 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 PCDH9Q9HC56 1237 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 UCKL1Q9NWZ5 548 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 SALL4Q9UJQ4 1053 aa19.91■□□□□ 0.78
SFXN1-209ENST00000508290 RCCD1A6NED2 376 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 NPIPB15A6NHN6 443 aaPredicted RBP19.9■□□□□ 0.78
SFXN1-209ENST00000508290 MIF4GDA9UHW6 222 aaKnown RBP19.9■□□□□ 0.78
SFXN1-209ENST00000508290 LMO7DNF2Z398 122 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 TRIM38O00635 465 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 ALPIP09923 528 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 CKMT1AP12532 417 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 CTNNA2P26232 953 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 HK3P52790 923 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 RWDD2BP57060 319 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 DAB2P98082 770 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 E2F1Q01094 437 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 DPTQ07507 201 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 ELOCQ15369 112 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 ZNF542PQ5EBM4 170 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 FAXCQ5TGI0 409 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 PNCKQ6P2M8 343 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 LVRNQ6Q4G3 990 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 BBS12Q6ZW61 710 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 ZNF765Q7L2R6 523 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 NT5DC3Q86UY8 548 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 TMPRSS12Q86WS5 348 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 CNTD1Q8N815 330 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 SPC24Q8NBT2 197 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 SCG3Q8WXD2 468 aaKnown RBP19.9■□□□□ 0.78
SFXN1-209ENST00000508290 IMP4Q96G21 291 aaKnown RBP19.9■□□□□ 0.78
SFXN1-209ENST00000508290 CNTNAP3BQ96NU0 1288 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 CNTNAP3Q9BZ76 1288 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 LACRTQ9GZZ8 138 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 SLC25A51Q9H1U9 297 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 TFR2Q9UP52 801 aa19.9■□□□□ 0.78
SFXN1-209ENST00000508290 DGKBQ9Y6T7 804 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms