RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TRAV19A0A0A6YYK7 116 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 CCDC162PA2VCL2 907 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 TRPC5OSA6NMA1 111 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 H7C0S8 307 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARRB2P32121 409 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 NUMBP49757 651 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 SGSHP51688 502 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 NFKB2Q00653 900 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 MPPE1Q53F39 396 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 SH2D4BQ5SQS7 431 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 OLFM1Q99784 485 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 FEM1AQ9BSK4 669 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 EMILIN2Q9BXX0 1053 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 CADM1Q9BY67 442 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 TAS2R1Q9NYW7 299 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 DNMT3BQ9UBC3 853 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 VPS28Q9UK41 221 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 SH3BP1Q9Y3L3 701 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 OR51B4Q9Y5P0 310 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 HTTP42858 3142 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 TRIM43BA6NCK2 446 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 TSPAN3O60637 253 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 DIAPH2O60879 1101 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 IPO13O94829 963 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 EZRP15311 586 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 DDX6P26196 483 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 GLRBP48167 497 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 NAGLUP54802 743 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 SATB1Q01826 763 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 DLG1Q12959 904 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 CSHL1Q14406 222 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZRSR2Q15696 482 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 MAVSQ7Z434 540 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZNF557Q8N988 423 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 CLP1Q92989 425 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 TRIM43Q96BQ3 446 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARMCX1Q9P291 453 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 IRAK3Q9Y616 596 aa17.31■□□□□ 0.36
TRAPPC11-204ENST00000505676 TTC24A2A3L6 582 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 PIGNO95427 931 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 ENO1P06733 434 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 CCDC166P0CW27 439 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 GABRR2P28476 465 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 RAP1GDS1P52306 607 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARL13AQ5H913 290 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 LILRA6Q6PI73 481 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARL14EPQ8N8R7 260 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 RHEBL1Q8TAI7 183 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 ADAMTS19Q8TE59 1207 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 PAWRQ96IZ0 340 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 ANKRD27Q96NW4 1050 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 NDNQ99608 321 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 MIPEPQ99797 713 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 AARSD1Q9BTE6 412 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 CCDC68Q9H2F9 335 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 TCF7L2Q9NQB0 619 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 SMPD4Q9NXE4 827 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 LHX3Q9UBR4 397 aa17.3■□□□□ 0.36
TRAPPC11-204ENST00000505676 B2RBV5 119 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 ANKRD66B4E2M5 251 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 TGM5O43548 720 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 PRLP01236 227 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 F7P08709 466 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 RGRP47804 291 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 TTPAP49638 278 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 RHOAP61586 193 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 PPIGQ13427 754 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 C6orf163Q5TEZ5 329 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 C16orf59Q7L2K0 433 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 TREML1Q86YW5 311 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 PRR11Q96HE9 360 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 MARCH4Q9P2E8 410 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 TMCO1Q9UM00 188 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 INSL6Q9Y581 213 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 DNAH12Q6ZR08 3092 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 GOLGA8CPA6NN73 597 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 PRR5-ARHGAP8B1AHC4 643 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 AURKAO14965 403 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 CNPP09543 421 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 TFEBP19484 476 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 GLDCP23378 1020 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 GMPRP36959 345 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARHGAP8P85298 464 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZNF460Q14592 562 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZNF789Q5FWF6 425 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 SWT1Q5T5J6 900 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 RINLQ6ZS11 566 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 TRIM67Q6ZTA4 783 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 STK40Q8N2I9 435 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 OR13C4Q8NGS5 318 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 POMKQ9H5K3 350 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 KIAA1522Q9P206 1035 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 CDYLQ9Y232 598 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 KCTD3Q9Y597 815 aa17.29■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 SOCS5O75159 536 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms