RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NMUR2Q9GZQ4 415 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 GPN2Q9H9Y4 310 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 GPBP1L1Q9HC44 474 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TREX1Q9NSU2 369 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MBD2Q9UBB5 411 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DAPK2Q9UIK4 370 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 KRBA1A5PL33 1030 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 C2CD4BA6NLJ0 364 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L5A8MUK1 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BOLA2-SMG1P6H3BVE0 249 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SNPHO15079 494 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM127O75204 238 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SIX3O95343 332 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 YES1P07947 543 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 JUNBP17275 347 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 F8A1P23610 371 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PSMC2P35998 433 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HADHAP40939 763 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ARCN1P48444 511 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BMXP51813 675 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 RNASE9P60153 205 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 COPZ1P61923 177 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PSMC5P62195 406 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NIPAL4Q0D2K0 466 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BAMBIQ13145 260 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PTPRRQ15256 657 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 FAM98CQ17RN3 349 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ALFQ53S48 1182 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BROXQ5VW32 411 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 FOXB2Q5VYV0 432 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 LMBRD2Q68DH5 695 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CYP4F22Q6NT55 531 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DUS1LQ6P1R4 473 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ABRAXAS1Q6UWZ7 409 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF517Q6ZMY9 492 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ESPNLQ6ZVH7 1005 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ADAMTSL2Q86TH1 951 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF280BQ86YH2 543 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HACE1Q8IYU2 909 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ARL10Q8N8L6 244 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 LNX1Q8TBB1 728 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ALG3Q92685 438 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TTC17Q96AE7 1141 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 VPS33AQ96AX1 596 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PPWD1Q96BP3 646 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF775Q96BV0 537 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TMCO6Q96DC7 493 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HSPBAP1Q96EW2 488 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TSNARE1Q96NA8 513 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 COQ7Q99807 217 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DDX50Q9BQ39 737 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BLZF1Q9H2G9 400 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NOL6Q9H6R4 1146 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CYP4F12Q9HCS2 524 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SLCO1B3Q9NPD5 702 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CXXC1Q9P0U4 656 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BAG5Q9UL15 447 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SNX7Q9UNH6 387 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TLR6Q9Y2C9 796 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CAB39Q9Y376 341 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 N6AMT1Q9Y5N5 214 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CSNK1G3Q9Y6M4 447 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 STON1Q9Y6Q2 735 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 WASF2Q9Y6W5 498 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ATRXP46100 2492 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L15C9J2P7 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L13C9JLJ4 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L11C9JVI0 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L18D6R9N7 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L22D6RA61 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L17D6RBQ6 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L19D6RCP7 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USP17L20D6RJB6 530 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 UBE2Q2LH0YL09 131 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NCAM2O15394 837 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 STX7O15400 261 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PSTPIP1O43586 416 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TLL1O43897 1013 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PRICKLE3O43900 615 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF821O75541 412 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CRYZL1O95825 349 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ECDO95905 644 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SERPINE1P05121 402 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 FGF4P08620 206 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CD48P09326 243 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DLDP09622 509 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SBK3P0C264 359 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MYL2P10916 166 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PLS3P13797 630 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PRKACBP22694 351 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HOXD10P28358 340 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PRKAR1BP31321 381 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SLC16A2P36021 539 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SERPINB5P36952 375 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CCR3P51677 355 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NEK3P51956 506 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF133P52736 654 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 RAD23AP54725 363 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms