RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 BAG2O95816 211 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 TBX18O95935 607 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 S1PR4O95977 384 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 HMBSP08397 361 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 FDXRP22570 491 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 SUOXP51687 545 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 INHBCP55103 352 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 OXCT1P55809 520 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 RPL26P61254 145 aaKnown RBP12.01□□□□□ -0.49
NUP54-202ENST00000502850 GNA12Q03113 381 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 DUSP4Q13115 394 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 ART3Q13508 389 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 SQLEQ14534 574 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 PDCD2Q16342 344 aaPredicted RBP12.01□□□□□ -0.49
NUP54-202ENST00000502850 RALGPS1Q5JS13 557 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 PGBD5Q8N414 524 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 DBF4BQ8NFT6 615 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 SLC26A7Q8TE54 656 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 DLG3Q92796 817 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 PSKH2Q96QS6 385 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 NR1H4Q96RI1 486 aaPredicted RBP12.01□□□□□ -0.49
NUP54-202ENST00000502850 TCF12Q99081 682 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 WDR55Q9H6Y2 383 aaPredicted RBP12.01□□□□□ -0.49
NUP54-202ENST00000502850 MEAF6Q9HAF1 191 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 SYTL2Q9HCH5 934 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 UTP6Q9NYH9 597 aaKnown RBP12.01□□□□□ -0.49
NUP54-202ENST00000502850 SLC27A5Q9Y2P5 690 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 BACE2Q9Y5Z0 518 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 WASF2Q9Y6W5 498 aa12.01□□□□□ -0.49
NUP54-202ENST00000502850 ILVBLA1L0T0 632 aa12□□□□□ -0.49
NUP54-202ENST00000502850 SDHDO14521 159 aa12□□□□□ -0.49
NUP54-202ENST00000502850 NBNO60934 754 aa12□□□□□ -0.49
NUP54-202ENST00000502850 SMNDC1O75940 238 aaKnown RBP eCLIP12□□□□□ -0.49
NUP54-202ENST00000502850 GALTP07902 379 aa12□□□□□ -0.49
NUP54-202ENST00000502850 IMPDH1P20839 514 aa12□□□□□ -0.49
NUP54-202ENST00000502850 ACVRL1P37023 503 aa12□□□□□ -0.49
NUP54-202ENST00000502850 SULT2A1Q06520 285 aa12□□□□□ -0.49
NUP54-202ENST00000502850 STX5Q13190 355 aa12□□□□□ -0.49
NUP54-202ENST00000502850 TYSND1Q2T9J0 566 aa12□□□□□ -0.49
NUP54-202ENST00000502850 RTP2Q5QGT7 225 aa12□□□□□ -0.49
NUP54-202ENST00000502850 HECTD3Q5T447 861 aa12□□□□□ -0.49
NUP54-202ENST00000502850 IL31Q6EBC2 164 aa12□□□□□ -0.49
NUP54-202ENST00000502850 NADSYN1Q6IA69 706 aa12□□□□□ -0.49
NUP54-202ENST00000502850 SLC8B1Q6J4K2 584 aa12□□□□□ -0.49
NUP54-202ENST00000502850 AFTPHQ6ULP2 937 aa12□□□□□ -0.49
NUP54-202ENST00000502850 ZNF783Q6ZMS7 281 aa12□□□□□ -0.49
NUP54-202ENST00000502850 CUZD1Q86UP6 607 aa12□□□□□ -0.49
NUP54-202ENST00000502850 TMEM126BQ8IUX1 230 aa12□□□□□ -0.49
NUP54-202ENST00000502850 OR4L1Q8NH43 312 aa12□□□□□ -0.49
NUP54-202ENST00000502850 RHEBL1Q8TAI7 183 aa12□□□□□ -0.49
NUP54-202ENST00000502850 BLOC1S5Q8TDH9 187 aa12□□□□□ -0.49
NUP54-202ENST00000502850 GPR152Q8TDT2 470 aa12□□□□□ -0.49
NUP54-202ENST00000502850 MICAL1Q8TDZ2 1067 aa12□□□□□ -0.49
NUP54-202ENST00000502850 MIEF2Q96C03 454 aa12□□□□□ -0.49
NUP54-202ENST00000502850 TTC1Q99614 292 aa12□□□□□ -0.49
NUP54-202ENST00000502850 CCDC68Q9H2F9 335 aa12□□□□□ -0.49
NUP54-202ENST00000502850 CCSER2Q9H7U1 834 aa12□□□□□ -0.49
NUP54-202ENST00000502850 MTRRQ9UBK8 725 aa12□□□□□ -0.49
NUP54-202ENST00000502850 SCOCQ9UIL1 159 aa12□□□□□ -0.49
NUP54-202ENST00000502850 TMCO1Q9UM00 188 aa12□□□□□ -0.49
NUP54-202ENST00000502850 MAGEA13PA6NCF6 341 aa12□□□□□ -0.49
NUP54-202ENST00000502850 AIM2O14862 343 aa12□□□□□ -0.49
NUP54-202ENST00000502850 AURKAO14965 403 aa12□□□□□ -0.49
NUP54-202ENST00000502850 KDELR3O43731 214 aa12□□□□□ -0.49
NUP54-202ENST00000502850 PDE5AO76074 875 aa12□□□□□ -0.49
NUP54-202ENST00000502850 GOT2P00505 430 aaKnown RBP12□□□□□ -0.49
NUP54-202ENST00000502850 SP100P23497 879 aaPredicted RBP12□□□□□ -0.49
NUP54-202ENST00000502850 PMLP29590 882 aa12□□□□□ -0.49
NUP54-202ENST00000502850 PPP3CCP48454 512 aa12□□□□□ -0.49
NUP54-202ENST00000502850 ATP4BP51164 291 aa12□□□□□ -0.49
NUP54-202ENST00000502850 CCNIQ14094 377 aa12□□□□□ -0.49
NUP54-202ENST00000502850 USP41Q3LFD5 358 aa12□□□□□ -0.49
NUP54-202ENST00000502850 ANO7Q6IWH7 933 aa12□□□□□ -0.49
NUP54-202ENST00000502850 CHSY3Q70JA7 882 aa12□□□□□ -0.49
NUP54-202ENST00000502850 RNF135Q8IUD6 432 aa12□□□□□ -0.49
NUP54-202ENST00000502850 FAM126BQ8IXS8 530 aa12□□□□□ -0.49
NUP54-202ENST00000502850 DSELQ8IZU8 1212 aa12□□□□□ -0.49
NUP54-202ENST00000502850 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
NUP54-202ENST00000502850 CATSPER1Q8NEC5 780 aa12□□□□□ -0.49
NUP54-202ENST00000502850 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
NUP54-202ENST00000502850 FAM136AQ96C01 138 aa12□□□□□ -0.49
NUP54-202ENST00000502850 CCDC124Q96CT7 223 aaKnown RBP12□□□□□ -0.49
NUP54-202ENST00000502850 SGF29Q96ES7 293 aa12□□□□□ -0.49
NUP54-202ENST00000502850 ZNF512Q96ME7 567 aaPredicted RBP12□□□□□ -0.49
NUP54-202ENST00000502850 CATSPER2Q96P56 530 aa12□□□□□ -0.49
NUP54-202ENST00000502850 ECSITQ9BQ95 431 aa12□□□□□ -0.49
NUP54-202ENST00000502850 MRPL1Q9BYD6 325 aaKnown RBP12□□□□□ -0.49
NUP54-202ENST00000502850 SHCBP1LQ9BZQ2 653 aa12□□□□□ -0.49
NUP54-202ENST00000502850 TFB2MQ9H5Q4 396 aaKnown RBP12□□□□□ -0.49
NUP54-202ENST00000502850 CWH43Q9H720 699 aa12□□□□□ -0.49
NUP54-202ENST00000502850 SPATS2LQ9NUQ6 558 aaKnown RBP12□□□□□ -0.49
NUP54-202ENST00000502850 NLE1Q9NVX2 485 aaPredicted RBP12□□□□□ -0.49
NUP54-202ENST00000502850 ZDHHC7Q9NXF8 308 aa12□□□□□ -0.49
NUP54-202ENST00000502850 C6orf203Q9P0P8 240 aaPredicted RBP12□□□□□ -0.49
NUP54-202ENST00000502850 COPG1Q9Y678 874 aaKnown RBP12□□□□□ -0.49
NUP54-202ENST00000502850 GBF1Q92538 1859 aa11.99□□□□□ -0.49
NUP54-202ENST00000502850 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.99□□□□□ -0.49
NUP54-202ENST00000502850 A0A1B0GVM2 712 aa11.99□□□□□ -0.49
NUP54-202ENST00000502850 A0A1W2PPC1 479 aa11.99□□□□□ -0.49
NUP54-202ENST00000502850 CARNS1A5YM72 827 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms