RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 KIAA1143Q96AT1 154 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 TBC1D31Q96DN5 1066 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 CDH19Q9H159 772 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 CARS2Q9HA77 564 aaKnown RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM248Q9NWD8 314 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 PPARGC1AQ9UBK2 798 aaKnown RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 LHX3Q9UBR4 397 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 APEX2Q9UBZ4 518 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 MRPS18BQ9Y676 258 aaKnown RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 DGKBQ9Y6T7 804 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 PRSS38A1L453 326 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 GOLGA6CA6NDK9 693 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 GOLGA6BA6NDN3 693 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 HGSO14964 777 aaPredicted RBP9.15□□□□□ -0.94
CCDC171-209ENST00000498725 RECQL5O94762 991 aaPredicted RBP9.15□□□□□ -0.94
CCDC171-209ENST00000498725 LRIG2O94898 1065 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 GNA14O95837 355 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 FGF1P05230 155 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 GOLGA6DP0CG33 693 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 CCNB1P14635 433 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 BMP6P22004 513 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 GNLYP22749 145 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 CSF2RBP32927 897 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 ADRA1BP35368 520 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 MMP12P39900 470 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 GNPDA1P46926 289 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 LIMK2P53671 638 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 KIAA1024LP59773 190 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 KLRB1Q12918 225 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 SEPT6Q14141 434 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 ACOX1Q15067 660 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 CYTH1Q15438 398 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 EXOC3L4Q17RC7 722 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 ACBD5Q5T8D3 534 aaPredicted RBP9.15□□□□□ -0.94
CCDC171-209ENST00000498725 DENND2CQ68D51 928 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 ZSWIM9Q86XI8 627 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 NRROSQ86YC3 692 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 CAMK1DQ8IU85 385 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 PYROXD2Q8N2H3 581 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 CCDC185Q8N715 623 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 TEX19Q8NA77 164 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 SPATA20Q8TB22 786 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 CPA5Q8WXQ8 436 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 SLC45A3Q96JT2 553 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 B3GNT4Q9C0J1 378 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 SUV39H2Q9H5I1 410 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 GOLGA6AQ9NYA3 693 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 TAAR2Q9P1P5 351 aa9.15□□□□□ -0.94
CCDC171-209ENST00000498725 HOOK1Q9UJC3 728 aaKnown RBP9.15□□□□□ -0.94
CCDC171-209ENST00000498725 ZNF106Q9H2Y7 1883 aaKnown RBP9.15□□□□□ -0.95
CCDC171-209ENST00000498725 USP9YO00507 2555 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ZSCAN5CA6NGD5 496 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ENO4A6NNW6 628 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PPM1DO15297 605 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ZW10O43264 779 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 BUB1BO60566 1050 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 VPS4BO75351 444 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PLEKP08567 350 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ELFN1P0C7U0 828 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 TCN2P20062 427 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 KELP23276 732 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PON1P27169 355 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 COL8A1P27658 744 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 GABRB2P47870 512 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 POLD2P49005 469 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ILF3Q12906 894 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PAK1Q13153 545 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 RAPGEF1Q13905 1077 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 FHL5Q5TD97 284 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 MANEALQ5VSG8 457 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ZNF787Q6DD87 383 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 LIPIQ6XZB0 460 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 TIPARPQ7Z3E1 657 aaKnown RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 DNAAF5Q86Y56 855 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 NLGN4XQ8N0W4 816 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 NLGN4YQ8NFZ3 816 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 GPT2Q8TD30 523 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PTCD2Q8WV60 388 aaKnown RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 RXFP2Q8WXD0 754 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 STARD8Q92502 1023 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 AHCYL2Q96HN2 611 aaKnown RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 FAM81BQ96LP2 452 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 DDA1Q9BW61 102 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 GSDMCQ9BYG8 508 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ASPSCR1Q9BZE9 553 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 NOL6Q9H6R4 1146 aaKnown RBP9.14□□□□□ -0.95
CCDC171-209ENST00000498725 WDR26Q9H7D7 661 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 APMAPQ9HDC9 416 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 TMEM59LQ9UK28 342 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PILRAQ9UKJ1 303 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 VPS4AQ9UN37 437 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 SRPK3Q9UPE1 567 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 NEU3Q9UQ49 428 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 MFHAS1Q9Y4C4 1052 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PLEKHM1Q9Y4G2 1056 aa9.14□□□□□ -0.95
CCDC171-209ENST00000498725 PCDHGA3Q9Y5H0 932 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms