RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TPD52L2O43399 206 aaKnown RBP5.04□□□□□ -1.6
SSR3-209ENST00000498205 CBX6O95503 412 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 SERPINC1P01008 464 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 ALPLP05186 524 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 ITGB6P18564 788 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 CASTP20810 708 aaKnown RBP5.04□□□□□ -1.6
SSR3-209ENST00000498205 MLH1P40692 756 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 DPP6P42658 865 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 PPM1FP49593 454 aaPredicted RBP5.04□□□□□ -1.6
SSR3-209ENST00000498205 SELENOVP59797 346 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 EGR4Q05215 589 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 G3BP1Q13283 466 aaKnown RBP eCLIP5.04□□□□□ -1.6
SSR3-209ENST00000498205 SLC12A1Q13621 1099 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 GCKRQ14397 625 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 TAF12Q16514 161 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 RPE65Q16518 533 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 AP5B1Q2VPB7 878 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 DCAF6Q58WW2 860 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 ZNF790Q6PG37 636 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 SARM1Q6SZW1 724 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 Q6ZTK2 550 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 PATL1Q86TB9 770 aaKnown RBP5.04□□□□□ -1.6
SSR3-209ENST00000498205 TEX45Q8NA69 505 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 SETD9Q8NE22 299 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 MYRIPQ8NFW9 859 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 OTULINQ96BN8 352 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 UPF3BQ9BZI7 483 aaKnown RBP5.04□□□□□ -1.6
SSR3-209ENST00000498205 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 CTDSP1Q9GZU7 261 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 IL25Q9H293 177 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 ALKBH4Q9NXW9 302 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 IFT80Q9P2H3 777 aaPredicted RBP5.04□□□□□ -1.6
SSR3-209ENST00000498205 CFAP45Q9UL16 551 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 PCDHA7Q9UN72 937 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 DGKBQ9Y6T7 804 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 C1orf167Q5SNV9 1468 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 CARMIL3Q8ND23 1372 aa5.04□□□□□ -1.6
SSR3-209ENST00000498205 FAM157AC9JC47 383 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 CIAO1O76071 339 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 GNLYP22749 145 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 GJB2P29033 226 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 CDKN2AP42771 156 aaKnown RBP5.03□□□□□ -1.6
SSR3-209ENST00000498205 RFX5P48382 616 aaPredicted RBP5.03□□□□□ -1.6
SSR3-209ENST00000498205 BLKP51451 505 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 CDH12P55289 794 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 BIRC3Q13489 604 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 ME3Q16798 604 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 FSCBQ5H9T9 825 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 WDR45BQ5MNZ6 344 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 TBC1D9BQ66K14 1250 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 BLOC1S2Q6QNY1 142 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 CWC27Q6UX04 472 aaKnown RBP5.03□□□□□ -1.6
SSR3-209ENST00000498205 IL20RBQ6UXL0 311 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 RBFAQ8N0V3 343 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 CPXCR1Q8N123 301 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 FBXL14Q8N1E6 418 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 IQCF1Q8N6M8 205 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 TDRD7Q8NHU6 1098 aaKnown RBP5.03□□□□□ -1.6
SSR3-209ENST00000498205 KIAA1524Q8TCG1 905 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 TMEM170AQ8WVE7 144 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 HSPH1Q92598 858 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 GTF3C6Q969F1 213 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 RNFT2Q96EX2 444 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 URB1-AS1Q96HZ7 61 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 GFM1Q96RP9 751 aaKnown RBP5.03□□□□□ -1.6
SSR3-209ENST00000498205 REEP2Q9BRK0 252 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 TAOK3Q9H2K8 898 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 STN1Q9H668 368 aaKnown RBP5.03□□□□□ -1.6
SSR3-209ENST00000498205 IL1RAPL2Q9NP60 686 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 RIC8AQ9NPQ8 531 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 PAPPAQ13219 1627 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 KDM6AO15550 1401 aaPredicted RBP5.03□□□□□ -1.6
SSR3-209ENST00000498205 RGPD2P0DJD1 1756 aa5.03□□□□□ -1.6
SSR3-209ENST00000498205 MAP3K15Q6ZN16 1313 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 SALL1Q9NSC2 1324 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 ARFGEF2Q9Y6D5 1785 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 GOLGA6L10A0A0M3HER8 536 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 SH2D7A6NKC9 451 aaPredicted RBP5.02□□□□□ -1.61
SSR3-209ENST00000498205 C17orf100A8MU93 164 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 LACTBL1A8MY62 500 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 KIF2AO00139 706 aaPredicted RBP5.02□□□□□ -1.61
SSR3-209ENST00000498205 PEX12O00623 359 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 IKBKBO14920 756 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 ASAP2O43150 1006 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 PFKFB2O60825 505 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 IGKV5-2P06315 115 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 ZFYP08048 801 aaPredicted RBP5.02□□□□□ -1.61
SSR3-209ENST00000498205 CCKARP32238 428 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 PSMC2P35998 433 aaKnown RBP5.02□□□□□ -1.61
SSR3-209ENST00000498205 HTR6P50406 440 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 VAMP2P63027 116 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 TLE2Q04725 743 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 CHRNDQ07001 517 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.02□□□□□ -1.61
SSR3-209ENST00000498205 TMEM71Q6P5X7 295 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 AACSQ86V21 672 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 ZNF354CQ86Y25 554 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 SUGP1Q8IWZ8 645 aaKnown RBP5.02□□□□□ -1.61
SSR3-209ENST00000498205 KBTBD3Q8NAB2 608 aa5.02□□□□□ -1.61
SSR3-209ENST00000498205 DNAAF1Q8NEP3 725 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms