RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	CSF3R	Q99062	836 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	HBEGF	Q99075	208 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TTYH2	Q9BSA4	534 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CDHR5	Q9HBB8	845 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	RNF146	Q9NTX7	359 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TRMT13	Q9NUP7	481 aa	Known RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MTF2	Q9Y483	593 aa	Predicted RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SNX8	Q9Y5X2	465 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SLC30A1	Q9Y6M5	507 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	LRP5	O75197	1615 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597		A0A087WZ62	844 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	FAM95C	A0A1B0GW59	222 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TCRBV5S1A1T	A0A578	114 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NCF1B	A6NI72	391 aa	Predicted RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NCF1C	A8MVU1	366 aa	Predicted RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MYCLP1	P12525	358 aa	Predicted RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	BMP4	P12644	408 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NCF1	P14598	390 aa	Predicted RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TPSB2	P20231	275 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	FSHR	P23945	695 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	IL4R	P24394	825 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	FMO3	P31513	532 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	IFNA8	P32881	189 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TPSAB1	Q15661	275 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ZNF470	Q6ECI4	717 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	C4orf22	Q6V702	233 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	PLEKHG7	Q6ZR37	379 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	RFPL4B	Q6ZWI9	263 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ITIH5	Q86UX2	942 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ZNF567	Q8N184	647 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TXNDC5	Q8NBS9	432 aa	Known RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NSUN6	Q8TEA1	469 aa	Known RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MRPL4	Q9BYD3	311 aa	Known RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ALG9	Q9H6U8	611 aa		10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	PTBP2	Q9UKA9	531 aa	Known RBP	10.65	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.65	□□□□□ -0.7	1e-6	■■■■■ 28.9
TRAPPC12-223	ENST00000497597	MEN1	O00255	615 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AXIN1	O15169	862 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RGS5	O15539	181 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NDUFS2	O75306	463 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FTH1	P02794	183 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FYN	P06241	537 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	C8B	P07358	591 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LINC00032	P0C843	101 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CHRNB1	P11230	501 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ITK	Q08881	620 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GTF2H3	Q13889	308 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FRG1	Q14331	258 aa	Known RBP	10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	EEF1DP3	Q658K8	133 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PMF1	Q6P1K2	205 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MAMDC4	Q6UXC1	1216 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KIAA0408	Q6ZU52	694 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	THAP5	Q7Z6K1	395 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LILRB4	Q8NHJ6	448 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RDH11	Q8TC12	318 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TRAPPC12	Q8WVT3	735 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ARNTL2	Q8WYA1	636 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RPL3L	Q92901	407 aa	Known RBP	10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HSFY1	Q96LI6	401 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CEP19	Q96LK0	163 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NSMCE2	Q96MF7	247 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PPM1M	Q96MI6	270 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GAD1	Q99259	594 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MRO	Q9BYG7	248 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ASPSCR1	Q9BZE9	553 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF302	Q9NR11	478 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KLHL3	Q9UH77	587 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CNOT11	Q9UKZ1	510 aa	Known RBP	10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RABL2B	Q9UNT1	228 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SHANK3	Q9BYB0	1731 aa		10.65	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MYO1G	B0I1T2	1018 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LRIG2	O94898	1065 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MBL2	P11226	248 aa	Predicted RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF37A	P17032	561 aa	Predicted RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DDX5	P17844	614 aa	Known RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AZGP1	P25311	298 aa	Known RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HTR1B	P28222	390 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	IL12A	P29459	219 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SULT1E1	P49888	294 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HLCS	P50747	726 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	XKR3	Q5GH77	459 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SPANXN3	Q5MJ09	141 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TBPL2	Q6SJ96	375 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ARHGAP36	Q6ZRI8	547 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	WDR49	Q8IV35	697 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KDM1B	Q8NB78	822 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ATL1	Q8WXF7	558 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZHX1-C8orf76	Q96EF9	292 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CTRC	Q99895	268 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	BDH2	Q9BUT1	245 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SEZ6L	Q9BYH1	1024 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TMEM39B	Q9GZU3	492 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RERGL	Q9H628	205 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AMBN	Q9NP70	447 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	IPO11	Q9UI26	975 aa	Known RBP	10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TEKT2	Q9UIF3	430 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CDH7	Q9ULB5	785 aa		10.64	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PDE10A	Q9Y233	779 aa		10.64	□□□□□ -0.71

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