RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RALGDSQ12967 914 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 LLGL1Q15334 1064 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 INAVAQ3KP66 663 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 LIPIQ6XZB0 460 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 GCNT7Q6ZNI0 430 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 ZC3H18Q86VM9 953 aaKnown RBP11.51□□□□□ -0.57
HLA-B-254ENST00000497377 TRIM58Q8NG06 486 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 OR2I1PQ8NGU4 316 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 LRRN4Q8WUT4 740 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 CENPTQ96BT3 561 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 SCRN2Q96FV2 425 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 IMP4Q96G21 291 aaKnown RBP11.51□□□□□ -0.57
HLA-B-254ENST00000497377 BMFQ96LC9 184 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 MCCC1Q96RQ3 725 aaPredicted RBP11.51□□□□□ -0.57
HLA-B-254ENST00000497377 MYOCQ99972 504 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 TDRD1Q9BXT4 1180 aaKnown RBP11.51□□□□□ -0.57
HLA-B-254ENST00000497377 SLC25A51Q9H1U9 297 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 LZTFL1Q9NQ48 299 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 GPR27Q9NS67 375 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 SEPT10Q9P0V9 454 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 TRHDEQ9UKU6 1024 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 FNDC3AQ9Y2H6 1198 aaKnown RBP11.51□□□□□ -0.57
HLA-B-254ENST00000497377 PPP2R2CQ9Y2T4 447 aa11.51□□□□□ -0.57
HLA-B-254ENST00000497377 H0Y8X5 98 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 H7C0C1 242 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 RAD51BO15315 384 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 FLRT2O43155 660 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 LZTS3O60299 673 aaPredicted RBP11.5□□□□□ -0.57
HLA-B-254ENST00000497377 CEACAM1P13688 526 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 CD59P13987 128 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 ITIH2P19823 946 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PTPN3P26045 913 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 ATP5OP48047 213 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 CLDN2P57739 230 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PFN3P60673 137 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 YPEL5P62699 121 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 SKOR1P84550 965 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 ARHGEF7Q14155 803 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PTK2BQ14289 1009 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 LRRC14Q15048 493 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 DBX2Q6ZNG2 339 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 Q6ZSR6 202 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PTAR1Q7Z6K3 402 aaPredicted RBP11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PIP4P1Q86T03 277 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 SPATS2Q86XZ4 545 aaKnown RBP11.5□□□□□ -0.57
HLA-B-254ENST00000497377 CDKL3Q8IVW4 592 aaPredicted RBP11.5□□□□□ -0.57
HLA-B-254ENST00000497377 RAVER1Q8IY67 606 aaKnown RBP11.5□□□□□ -0.57
HLA-B-254ENST00000497377 TP53I13Q8NBR0 393 aaPredicted RBP11.5□□□□□ -0.57
HLA-B-254ENST00000497377 OR13H1Q8NG92 308 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PIH1D2Q8WWB5 315 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 HTR3CQ8WXA8 447 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 TEKT5Q96M29 485 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 AGAP3Q96P47 875 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 ADGRE3Q9BY15 652 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 IL21RQ9HBE5 538 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 GLOD4Q9HC38 313 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PCDH9Q9HC56 1237 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 B4GALT6Q9UBX8 382 aa11.5□□□□□ -0.57
HLA-B-254ENST00000497377 PACSIN2Q9UNF0 486 aaPredicted RBP11.5□□□□□ -0.57
HLA-B-254ENST00000497377 CNOT1A5YKK6 2376 aaKnown RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 A0A0J9YYE9 177 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 DCDC2BA2VCK2 349 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 POM121BA6NF01 834 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 RECQL5O94762 991 aaPredicted RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 STK10O94804 968 aaKnown RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 HEXIM1O94992 359 aaKnown RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 TRBC1P01850 177 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 PRKCGP05129 697 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 MMP2P08253 660 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 PDHA1P08559 390 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 ZNF30P17039 623 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 IGFALSP35858 605 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 CD86P42081 329 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 EIF3EP60228 445 aaKnown RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 OTUD4Q01804 1114 aaKnown RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 WASHC5Q12768 1159 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 MTM1Q13496 603 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 RPS6KA1Q15418 735 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 WSCD2Q2TBF2 565 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 SEL1L2Q5TEA6 688 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 MEI1Q5TIA1 1274 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 NAXDQ8IW45 347 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 TADA1Q96BN2 335 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 PDLIM2Q96JY6 352 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 PPP1R2P1Q96PQ5 205 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 LYSMD1Q96S90 227 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 SRPK1Q96SB4 655 aaKnown RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 CARD9Q9H257 536 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 KLHL8Q9P2G9 620 aaPredicted RBP11.49□□□□□ -0.57
HLA-B-254ENST00000497377 CHKBQ9Y259 395 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 CA5BQ9Y2D0 317 aa11.49□□□□□ -0.57
HLA-B-254ENST00000497377 PCNX2A6NKB5 2137 aa11.48□□□□□ -0.57
HLA-B-254ENST00000497377 SPTY2D1-AS1A0A0U1RR47 76 aa11.48□□□□□ -0.57
HLA-B-254ENST00000497377 CAPN8A6NHC0 703 aa11.48□□□□□ -0.57
HLA-B-254ENST00000497377 NPIPB15A6NHN6 443 aaPredicted RBP11.48□□□□□ -0.57
HLA-B-254ENST00000497377 KCNK3O14649 394 aa11.48□□□□□ -0.57
HLA-B-254ENST00000497377 ZSCAN12O43309 604 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms