RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TPD52L1Q16890 204 aaPredicted RBP17.73■□□□□ 0.43
NUP50-218ENST00000493456 SKIDA1Q1XH10 827 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 VWA3BQ502W6 1294 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 SLFN11Q7Z7L1 901 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 UMODL1-AS1Q8N2C9 162 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 RCBTB1Q8NDN9 531 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 CCL4L1Q8NHW4 92 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 JOSD2Q8TAC2 188 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 CCDC74BQ96LY2 380 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 NUDT22Q9BRQ3 303 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 DDA1Q9BW61 102 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 NAA15Q9BXJ9 866 aaKnown RBP17.73■□□□□ 0.43
NUP50-218ENST00000493456 ATP13A3Q9H7F0 1226 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 CATSPERBQ9H7T0 1116 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 USP9YO00507 2555 aaPredicted RBP17.72■□□□□ 0.43
NUP50-218ENST00000493456 CLEC18AA5D8T8 446 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 ZNF891A8MT65 544 aaPredicted RBP17.72■□□□□ 0.43
NUP50-218ENST00000493456 F8VZ95 297 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 BUB1BO60566 1050 aaPredicted RBP17.72■□□□□ 0.43
NUP50-218ENST00000493456 FGF3P11487 239 aaPredicted RBP17.72■□□□□ 0.43
NUP50-218ENST00000493456 CCNB1P14635 433 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 LIFP15018 202 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 UCHL3P15374 230 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 CR2P20023 1033 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 ALDH4A1P30038 563 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 UGT1A3P35503 534 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 GPR3P46089 330 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 ARSDP51689 593 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 MAZP56270 477 aaKnown RBP17.72■□□□□ 0.43
NUP50-218ENST00000493456 ILF3Q12906 894 aaKnown RBP eCLIP17.72■□□□□ 0.43
NUP50-218ENST00000493456 RALGDSQ12967 914 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 CLEC18BQ6UXF7 455 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 LIPIQ6XZB0 460 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 ZSWIM9Q86XI8 627 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 CAMK1DQ8IU85 385 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 CLEC18CQ8NCF0 446 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 AGBL5Q8NDL9 886 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 ZDHHC1Q8WTX9 485 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 DPYSL5Q9BPU6 564 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 GSDMCQ9BYG8 508 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 STK33Q9BYT3 514 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 ASPSCR1Q9BZE9 553 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 PDFQ9HBH1 243 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 KIAA1468Q9P260 1216 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 MOSPD1Q9UJG1 213 aa17.72■□□□□ 0.43
NUP50-218ENST00000493456 FGF10O15520 208 aaPredicted RBP17.71■□□□□ 0.43
NUP50-218ENST00000493456 CYP1A1P04798 512 aaPredicted RBP17.71■□□□□ 0.43
NUP50-218ENST00000493456 PRKCGP05129 697 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 CSNK1DP48730 415 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 LIMK2P53671 638 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 AIF1P55008 147 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 GSCP56915 257 aaPredicted RBP17.71■□□□□ 0.43
NUP50-218ENST00000493456 PEX6Q13608 980 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 MIIPQ5JXC2 388 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 CACNA2D3Q8IZS8 1091 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 PYROXD2Q8N2H3 581 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 OR4D9Q8NGE8 314 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 C11orf70Q9BRQ4 267 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.43
NUP50-218ENST00000493456 CARS2Q9HA77 564 aaKnown RBP17.71■□□□□ 0.43
NUP50-218ENST00000493456 SPATS2LQ9NUQ6 558 aaKnown RBP17.71■□□□□ 0.43
NUP50-218ENST00000493456 NOCTQ9UK39 431 aaKnown RBP17.71■□□□□ 0.43
NUP50-218ENST00000493456 CREB3O43889 395 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 FGF1P05230 155 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 KRT3P12035 628 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 MYCLP1P12525 358 aaPredicted RBP17.7■□□□□ 0.42
NUP50-218ENST00000493456 CD1CP29017 333 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 CSTF2P33240 577 aaKnown RBP eCLIP17.7■□□□□ 0.42
NUP50-218ENST00000493456 RAB15P59190 212 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 POLR2LP62875 67 aaKnown RBP17.7■□□□□ 0.42
NUP50-218ENST00000493456 CDR2Q01850 454 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 BIRC2Q13490 618 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 AFMIDQ63HM1 303 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 PNCKQ6P2M8 343 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 TRIM72Q6ZMU5 477 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 DPPA4Q7L190 304 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 C9orf43Q8TAL5 461 aaPredicted RBP17.7■□□□□ 0.42
NUP50-218ENST00000493456 PMEPA1Q969W9 287 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 ECHDC3Q96DC8 303 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 LGR4Q9BXB1 951 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 TRNAU1APQ9NX07 287 aaKnown RBP17.7■□□□□ 0.42
NUP50-218ENST00000493456 TAAR2Q9P1P5 351 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 B3GALT1Q9Y5Z6 326 aa17.7■□□□□ 0.42
NUP50-218ENST00000493456 RAD1O60671 282 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 PRAMEF11O60813 436 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 ECEL1O95672 775 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 THRAP10827 490 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 GM2AP17900 193 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 GPD1P21695 349 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 HTR7P34969 479 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 BCL2L1Q07817 233 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 SQSTM1Q13501 440 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 PHLDB2Q86SQ0 1253 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 SRLQ86TD4 932 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 NRROSQ86YC3 692 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 FAM26EQ8N5C1 309 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 SLC20A1Q8WUM9 679 aa17.69■□□□□ 0.42
NUP50-218ENST00000493456 ART4Q93070 314 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms