RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SLC26A3P40879 764 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 SKIV2L2P42285 1042 aaKnown RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 ABCE1P61221 599 aaKnown RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 PLEKHG6Q3KR16 790 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF789Q5FWF6 425 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 HECTD2Q5U5R9 776 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 ZYG11AQ6WRX3 759 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 TBC1D1Q86TI0 1168 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 C10orf67Q8IYJ2 551 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 TMEM151AQ8N4L1 468 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 MDGA1Q8NFP4 955 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 OR13C4Q8NGS5 318 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 PPP4R1Q8TF05 950 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 KCTD4Q8WVF5 259 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 ERP27Q96DN0 273 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 LMLNQ96KR4 655 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 GPR78Q96P69 363 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 C20orf27Q9GZN8 174 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 MYLK2Q9H1R3 596 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 SUDS3Q9H7L9 328 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 CATSPERZQ9NTU4 200 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 OXSMQ9NWU1 459 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 ZDHHC7Q9NXF8 308 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 PLK2Q9NYY3 685 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 MARCH4Q9P2E8 410 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 TBC1D14Q9P2M4 693 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 CCL26Q9Y258 94 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 TMEM114B3SHH9 223 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 BUD23O43709 281 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 DNAJC6O75061 913 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 ATP5BP06576 529 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 TCF3P15923 654 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 EPCAMP16422 314 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 RPL26P61254 145 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 ITGA9Q13797 1035 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 PTPRCAPQ14761 206 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 PRSS36Q5K4E3 855 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 RBM20Q5T481 1227 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 LRRC8EQ6NSJ5 796 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 FAM45BPQ6NSW5 357 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 ELMSAN1Q6PJG2 1045 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 AFTPHQ6ULP2 937 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 WDR75Q8IWA0 830 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 MICALL1Q8N3F8 863 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 FSTL5Q8N475 847 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 OR4K2Q8NGD2 314 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 TTC8Q8TAM2 541 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 PIWIL2Q8TC59 973 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 FAM45AQ8TCE6 357 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 NXNL1Q96CM4 212 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 SCYL1Q96KG9 808 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 TCF12Q99081 682 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 MRPL57Q9BQC6 102 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 HTATIP2Q9BUP3 242 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF395Q9H8N7 513 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 INTS10Q9NVR2 710 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 HEY2Q9UBP5 337 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 CLEC4EQ9ULY5 219 aa14.07□□□□□ -0.16
PTPN7-216ENST00000492977 RPL26L1Q9UNX3 145 aaKnown RBP14.07□□□□□ -0.16
PTPN7-216ENST00000492977 TARM1B6A8C7 271 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 H0YHG0 523 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 K7ERQ8 282 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 ZNF197O14709 1029 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 ITM2AO43736 263 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 PENKP01210 267 aaPredicted RBP14.06□□□□□ -0.16
PTPN7-216ENST00000492977 PMLP29590 882 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 CD70P32970 193 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 GRIA4P48058 902 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 FAM83EQ2M2I3 478 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 SLC5A9Q2M3M2 681 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 TYSND1Q2T9J0 566 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 ATXN7L2Q5T6C5 722 aaPredicted RBP14.06□□□□□ -0.16
PTPN7-216ENST00000492977 ARMC12Q5T9G4 340 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 AGAP9Q5VTM2 703 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 MTDHQ86UE4 582 aaKnown RBP14.06□□□□□ -0.16
PTPN7-216ENST00000492977 PDCD6IPQ8WUM4 868 aaKnown RBP14.06□□□□□ -0.16
PTPN7-216ENST00000492977 NDNQ99608 321 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 OLFM1Q99784 485 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 WWP1Q9H0M0 922 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 MRPL46Q9H2W6 279 aaKnown RBP14.06□□□□□ -0.16
PTPN7-216ENST00000492977 FAM96AQ9H5X1 160 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 STN1Q9H668 368 aaKnown RBP14.06□□□□□ -0.16
PTPN7-216ENST00000492977 ECT2Q9H8V3 914 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 MAGEE1Q9HCI5 957 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 TXLNGQ9NUQ3 528 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 ZFP69BQ9UJL9 534 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 INTS6Q9UL03 887 aaKnown RBP14.06□□□□□ -0.16
PTPN7-216ENST00000492977 NOTCH4Q99466 2003 aa14.06□□□□□ -0.16
PTPN7-216ENST00000492977 CFAP73A6NFT4 308 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 HTRA2O43464 458 aaPredicted RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 SMAD6O43541 496 aaKnown RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 ARHGEF15O94989 841 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 PGLSO95336 258 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 LTA4HP09960 611 aaKnown RBP14.05□□□□□ -0.16
PTPN7-216ENST00000492977 SBK3P0C264 359 aa14.05□□□□□ -0.16
PTPN7-216ENST00000492977 MYOGP15173 224 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms