RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 EFL1Q7Z2Z2 1120 aaKnown RBP12.59□□□□□ -0.39
SRRM1-216ENST00000489130 KCTD6Q8NC69 237 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 TPCN2Q8NHX9 752 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 MAPK15Q8TD08 544 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 PDCD6IPQ8WUM4 868 aaKnown RBP12.59□□□□□ -0.39
SRRM1-216ENST00000489130 MAML1Q92585 1016 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 NAT6Q93015 286 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 FUBP1Q96AE4 644 aaKnown RBP12.59□□□□□ -0.39
SRRM1-216ENST00000489130 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 COQ10AQ96MF6 247 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 RBM15Q96T37 977 aaKnown RBP eCLIP12.59□□□□□ -0.39
SRRM1-216ENST00000489130 ABCG4Q9H172 646 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 TSPY26PQ9H489 355 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 ZNHIT6Q9NWK9 470 aaKnown RBP12.59□□□□□ -0.39
SRRM1-216ENST00000489130 KCTD5Q9NXV2 234 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 PPIL1Q9Y3C6 166 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 PCDHB1Q9Y5F3 818 aa12.59□□□□□ -0.39
SRRM1-216ENST00000489130 ANKRD36A6QL64 1941 aa12.58□□□□□ -0.39
SRRM1-216ENST00000489130 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 TMEM202A6NGA9 273 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 A8MX80 341 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 PSMD11O00231 422 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 CACNB4O00305 520 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 TNFRSF10CO14798 259 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 FZD6O60353 706 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 BRINP1O60477 761 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 MFAP3LO75121 409 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 CSO75390 466 aaKnown RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 CTSEP14091 401 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 LHCGRP22888 699 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 KELP23276 732 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 VIPR1P32241 457 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 GJC1P36383 396 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 ACOX1Q15067 660 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 PERM1Q5SV97 790 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 ARMC12Q5T9G4 340 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 TIGD7Q6NT04 549 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 PNCKQ6P2M8 343 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 MAP7D3Q8IWC1 876 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 CBARPQ8N350 705 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 ARL10Q8N8L6 244 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 OR56A4Q8NGH8 313 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 SNIP1Q8TAD8 396 aaKnown RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 HNRNPLLQ8WVV9 542 aaKnown RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 SCG3Q8WXD2 468 aaKnown RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 OR1E3Q8WZA6 343 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 DTD2Q96FN9 168 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 SCRN2Q96FV2 425 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 TSGA13Q96PP4 275 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 MCCC1Q96RQ3 725 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 POLR1EQ9GZS1 481 aaKnown RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 WDR26Q9H7D7 661 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 FGF22Q9HCT0 170 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 NT5MQ9NPB1 228 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 DOLKQ9UPQ8 538 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 LRP4O75096 1905 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 DSPP15924 2871 aaKnown RBP12.58□□□□□ -0.4
SRRM1-216ENST00000489130 FAM208BQ5VWN6 2430 aa12.58□□□□□ -0.4
SRRM1-216ENST00000489130 MYLKQ15746 1914 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 NPIPB15A6NHN6 443 aaPredicted RBP12.57□□□□□ -0.4
SRRM1-216ENST00000489130 MATN3O15232 486 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 TLX3O43711 291 aaPredicted RBP12.57□□□□□ -0.4
SRRM1-216ENST00000489130 AKR1B10O60218 316 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 TCEA3O75764 348 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 TNFP01375 233 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 TPM1P09493 284 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 CYP2A6P11509 494 aaPredicted RBP12.57□□□□□ -0.4
SRRM1-216ENST00000489130 CCNCP24863 283 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 IFI16Q16666 785 aaKnown RBP12.57□□□□□ -0.4
SRRM1-216ENST00000489130 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
SRRM1-216ENST00000489130 TBC1D25Q3MII6 688 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 USP45Q70EL2 814 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 RD3Q7Z3Z2 195 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 GKN2Q86XP6 184 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 PELI3Q8N2H9 469 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 PQLC3Q8N755 202 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 KYQ8NBH2 561 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 WDR48Q8TAF3 677 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 PIH1D2Q8WWB5 315 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 GRAMD1AQ96CP6 724 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 NUS1Q96E22 293 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 CHP1Q99653 195 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 SEMA3CQ99985 751 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 LGR4Q9BXB1 951 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 AMACRQ9UHK6 382 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 PADI4Q9UM07 663 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 RAI2Q9Y5P3 530 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 ACACAQ13085 2346 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 KNTC1P50748 2209 aa12.57□□□□□ -0.4
SRRM1-216ENST00000489130 COL27A1Q8IZC6 1860 aaPredicted RBP12.57□□□□□ -0.4
SRRM1-216ENST00000489130 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 PDE2AO00408 941 aaPredicted RBP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 USP12O75317 370 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 DXOO77932 396 aaKnown RBP12.56□□□□□ -0.4
SRRM1-216ENST00000489130 MTA2O94776 668 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 MAP3K6O95382 1288 aa12.56□□□□□ -0.4
SRRM1-216ENST00000489130 PDHA1P08559 390 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms