RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CELA2BP08218 269 aaPredicted RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 CCNB1P14635 433 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 JUPP14923 745 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 MX2P20592 715 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 LHCGRP22888 699 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 INSM1Q01101 510 aaPredicted RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 ARMC12Q5T9G4 340 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 LRRC38Q5VT99 294 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 SLC9A4Q6AI14 798 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 ZCCHC8Q6NZY4 707 aaKnown RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 ENPP7Q6UWV6 458 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 HID1Q8IV36 788 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 CBARPQ8N350 705 aaPredicted RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 FUBP1Q96AE4 644 aaKnown RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 HDAC11Q96DB2 347 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 SMIM14Q96QK8 99 aa25.05■■□□□ 1.6
HMGN1-217ENST00000489072 MCCC1Q96RQ3 725 aaPredicted RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 CCDC86Q9H6F5 360 aaKnown RBP25.05■■□□□ 1.6
HMGN1-217ENST00000489072 CELSR3Q9NYQ7 3312 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 LMO7DNF2Z398 122 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 TPP1O14773 563 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 FZD6O60353 706 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 HLA-DQB2P05538 268 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 TSHRP16473 764 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 CTPS1P17812 591 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 COMTP21964 271 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 HNF1BP35680 557 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 SLC1A1P43005 524 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 MAGEA1P43355 309 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 HK3P52790 923 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 NIPAL4Q0D2K0 466 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 TARDBPQ13148 414 aaKnown RBP eCLIP25.04■■□□□ 1.69e-9■■■□□ 17.5
HMGN1-217ENST00000489072 TSPAN33Q86UF1 283 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 VSIG1Q86XK7 387 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 PROSER1Q86XN7 944 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 CCNYQ8ND76 341 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 ARRDC2Q8TBH0 407 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 SCRN2Q96FV2 425 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 WDR92Q96MX6 357 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 LGMNQ99538 433 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 IL12RB2Q99665 862 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 AMACRQ9UHK6 382 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 SALL4Q9UJQ4 1053 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 TFR2Q9UP52 801 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 PPIL1Q9Y3C6 166 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 LAMA5O15230 3695 aa25.04■■□□□ 1.6
HMGN1-217ENST00000489072 A0A0U1RQS6 177 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 ALPIP09923 528 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 CYP2A6P11509 494 aaPredicted RBP25.03■■□□□ 1.6
HMGN1-217ENST00000489072 TNNT1P13805 278 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 HTR1BP28222 390 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 TRIM23P36406 574 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 KIAA1024LP59773 190 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 SRP54P61011 504 aaKnown RBP25.03■■□□□ 1.6
HMGN1-217ENST00000489072 DENND2CQ68D51 928 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 ESRP1Q6NXG1 681 aaKnown RBP25.03■■□□□ 1.6
HMGN1-217ENST00000489072 HSD11B1LQ7Z5J1 315 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 GAS2L3Q86XJ1 694 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 RHOT1Q8IXI2 618 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 CCDC13Q8IYE1 715 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 PDCD7Q8N8D1 485 aaKnown RBP25.03■■□□□ 1.6
HMGN1-217ENST00000489072 RNF25Q96BH1 459 aaPredicted RBP25.03■■□□□ 1.6
HMGN1-217ENST00000489072 NUS1Q96E22 293 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 MRFAP1L1Q96HT8 127 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 USP29Q9HBJ7 922 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 KLQ9UEF7 1012 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 TTLL3Q9Y4R7 772 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 HEY1Q9Y5J3 304 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 ZFHX4Q86UP3 3567 aa25.03■■□□□ 1.6
HMGN1-217ENST00000489072 TMEM202A6NGA9 273 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 YY2O15391 372 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 RASGRP1O95267 797 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 BLKP51451 505 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 HADHBP55084 474 aaKnown RBP25.02■■□□□ 1.6
HMGN1-217ENST00000489072 E2F1Q01094 437 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 PPIDQ08752 370 aaKnown RBP25.02■■□□□ 1.6
HMGN1-217ENST00000489072 TCEA2Q15560 299 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 FAM182AQ5T1J6 154 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 PNCKQ6P2M8 343 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 NPNTQ6UXI9 565 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 RD3Q7Z3Z2 195 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 TPCN2Q8NHX9 752 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 OR1E3Q8WZA6 343 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 PDXPQ96GD0 296 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 ZNF830Q96NB3 372 aaPredicted RBP25.02■■□□□ 1.6
HMGN1-217ENST00000489072 BOCQ9BWV1 1114 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 LGR4Q9BXB1 951 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 GOLPH3Q9H4A6 298 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 ZFYVE26Q68DK2 2539 aa25.02■■□□□ 1.6
HMGN1-217ENST00000489072 KCNK1O00180 336 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 APOL1O14791 398 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 SPOPO43791 374 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 JCHAINP01591 159 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 ANXA6P08133 673 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 CES1P23141 567 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 ETV3P41162 512 aa25.01■■□□□ 1.59
HMGN1-217ENST00000489072 NOP2P46087 812 aaKnown RBP25.01■■□□□ 1.59
HMGN1-217ENST00000489072 DUSP3P51452 185 aaPredicted RBP25.01■■□□□ 1.59
HMGN1-217ENST00000489072 CYP4F3Q08477 520 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms