RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 POTEHQ6S545 545 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 TFAP2DQ7Z6R9 452 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 ERI1Q8IV48 349 aaKnown RBP13.8□□□□□ -0.2
COPS7B-221ENST00000488111 ZNF683Q8IZ20 524 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 CFAP52Q8N1V2 620 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 HIPK4Q8NE63 616 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 RPRD1AQ96P16 312 aaPredicted RBP13.8□□□□□ -0.2
COPS7B-221ENST00000488111 XAB2Q9HCS7 855 aaKnown RBP13.8□□□□□ -0.2
COPS7B-221ENST00000488111 AGO1Q9UL18 857 aaKnown RBP13.8□□□□□ -0.2
COPS7B-221ENST00000488111 TTLL3Q9Y4R7 772 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 H3BSA7 217 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 SIN3BO75182 1162 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 GLP2RO95838 553 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 TACR2P21452 398 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 NUMBP49757 651 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 MTTPP55157 894 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 RARS2Q5T160 578 aaKnown RBP13.8□□□□□ -0.2
COPS7B-221ENST00000488111 LGI2Q8N0V4 545 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 FAM71DQ8N9W8 422 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 ZSWIM3Q96MP5 696 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 ZNF778Q96MU6 729 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 LGMNQ99538 433 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
COPS7B-221ENST00000488111 CCL26Q9Y258 94 aa13.8□□□□□ -0.2
COPS7B-221ENST00000488111 ATG2AQ2TAZ0 1938 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 ANAPC1Q9H1A4 1944 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 SH3PXD2BA1X283 911 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 TSPAN3O60637 253 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 FAM58BPP0C7Q3 252 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 RBL1P28749 1068 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 SLC11A2P49281 568 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 PAFAH1B3Q15102 231 aaKnown RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 PRSS36Q5K4E3 855 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 TCHHL1Q5QJ38 904 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 NCCRP1Q6ZVX7 275 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 DEFB107AQ8IZN7 70 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 TAB3Q8N5C8 712 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 ITFG1Q8TB96 612 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 BIRC8Q96P09 236 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 PRPF18Q99633 342 aaKnown RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 NSUN3Q9H649 340 aaKnown RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 INIPQ9NRY2 104 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 APPL1Q9UKG1 709 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 PORP16435 677 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 CEBPBP17676 345 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 ELMSAN1Q6PJG2 1045 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 ISLR2Q6UXK2 745 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 WDR75Q8IWA0 830 aaKnown RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 CCNYQ8ND76 341 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 DEPDC1BQ8WUY9 529 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 CNBD2Q96M20 576 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 CATSPERBQ9H7T0 1116 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 CFAP97Q9P2B7 532 aa13.79□□□□□ -0.2
COPS7B-221ENST00000488111 RSL24D1Q9UHA3 163 aaKnown RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 APOBEC2Q9Y235 224 aaKnown RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 MRPS23Q9Y3D9 190 aaKnown RBP13.79□□□□□ -0.2
COPS7B-221ENST00000488111 C5orf42Q9H799 3197 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 F5H5T6 163 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 BOLA2-SMG1P6H3BVE0 249 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ZNF189O75820 626 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 HOXC13P31276 330 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 CRHR1P34998 444 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 AVPR1AP37288 418 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 NR2C2P49116 596 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 SGSHP51688 502 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ZNF135P52742 658 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 SLC7A9P82251 487 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ADGRE1Q14246 886 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 GK3PQ14409 553 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 GRIN2CQ14957 1233 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 PATL1Q86TB9 770 aaKnown RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 CMTM8Q8IZV2 173 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 PPM1NQ8N819 430 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 PIWIL2Q8TC59 973 aaKnown RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 TFB1MQ8WVM0 346 aaKnown RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 CMTM5Q96DZ9 223 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 PHF12Q96QT6 1004 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ZYG11BQ9C0D3 744 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 TTYH1Q9H313 450 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 SFXN1Q9H9B4 322 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 MYOCOSA0A1B0GUC4 107 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 LEFTY2O00292 366 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 KCNN4O15554 427 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 GREM1O60565 184 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 CAPNS1P04632 268 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 PRDX6P30041 224 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 HSPA13P48723 471 aa13.78□□□□□ -0.2
COPS7B-221ENST00000488111 CDK9P50750 372 aaKnown RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 RPS24P62847 133 aaKnown RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-221ENST00000488111 ARHGAP15Q53QZ3 475 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms