RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PRDM12Q9H4Q4 367 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 MAGEE1Q9HCI5 957 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 CYP4F12Q9HCS2 524 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 CASS4Q9NQ75 786 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 ZNF639Q9UID6 485 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 BTAF1O14981 1849 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 A0A0J9YYE9 177 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 TCRBV5S2A0A599 114 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 C9JVG2 144 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 NR5A2O00482 541 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 NUAK1O60285 661 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 GUCY1B2O75343 617 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 GPIP06744 558 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 NFICP08651 508 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 ALDOCP09972 364 aaKnown RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 CXCL8P10145 99 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 NCK1P16333 377 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 MZF1P28698 734 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 BNIP2Q12982 314 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 SNX17Q15036 470 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 SKIV2LQ15477 1246 aaKnown RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 PYCR3Q53H96 274 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 CYHR1Q6ZMK1 362 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 LARP4Q71RC2 724 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 AKAP14Q86UN6 197 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 CUZD1Q86UP6 607 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 MFSD6LQ8IWD5 586 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 LILRB4Q8NHJ6 448 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 CLEC4CQ8WTT0 213 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 FAR2Q96K12 515 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 ZNF229Q9UJW7 825 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 BAG5Q9UL15 447 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 TMA7Q9Y2S6 64 aaKnown RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 RIPK3Q9Y572 518 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 ANK1P16157 1881 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 ZNF638Q14966 1978 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 MAGEB16A2A368 324 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 NOTOA8MTQ0 251 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 INMTO95050 263 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 AP2A1O95782 977 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 LDLRP01130 860 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 CHRM3P20309 590 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 KCNA5P22460 613 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 SLC6A2P23975 617 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ARL4AP40617 200 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 DNAJB13P59910 316 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 FKBP1AP62942 108 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ECT2LQ008S8 904 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ACAP2Q15057 778 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 PSMD5Q16401 504 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 IMPG1Q17R60 797 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 LRIT3Q3SXY7 679 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 FAM209AQ5JX71 171 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 RBM48Q5RL73 367 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 PPP1R26Q5T8A7 1209 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 CLEC6AQ6EIG7 209 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 CATSPER4Q7RTX7 472 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 IFNEQ86WN2 208 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ARMC8Q8IUR7 673 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 MINDY1Q8N5J2 469 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 HEXDCQ8WVB3 486 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 CENPIQ92674 756 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 SLC30A3Q99726 388 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 C11orf84Q9BUA3 381 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ALOXE3Q9BYJ1 711 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 MRPL46Q9H2W6 279 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 NOL6Q9H6R4 1146 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 TMPRSS4Q9NRS4 437 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 PCDHGA11Q9Y5H2 935 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 FXYD1O00168 92 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 TNFRSF10AO00220 468 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 RGS13O14921 159 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 PRKCBP05771 671 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ATP5F1P24539 256 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 SERPINB1P30740 379 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 CD68P34810 354 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 RAB10P61026 200 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 SLC13A2Q13183 592 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 E2F2Q14209 437 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 GEN1Q17RS7 908 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 UGT3A2Q3SY77 523 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 SMYD5Q6GMV2 418 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 XRRA1Q6P2D8 792 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 THAP5Q7Z6K1 395 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 GALNT13Q8IUC8 556 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 TBC1D21Q8IYX1 336 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 ELMOD1Q8N336 334 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 PAPD5Q8NDF8 572 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 NDNFQ8TB73 568 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 CALML6Q8TD86 181 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 HTRA1Q92743 480 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 MUL1Q969V5 352 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 TXNDC15Q96J42 360 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 C3orf30Q96M34 536 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 SEPHS2Q99611 448 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms