RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, human

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPA-203	ENST00000485042	ABCC11	Q96J66	1382 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	WNK3	Q9BYP7	1800 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	AKAP12	Q02952	1782 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ITSN1	Q15811	1721 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	TMEM191C	A6NGB0	347 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	DDTL	A6NHG4	134 aa	Predicted RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CBY3	A6NI87	242 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042		A8MZ25	164 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	SH2B2	O14492	632 aa	Predicted RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CTDSP2	O14595	271 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	SEC14L5	O43304	696 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ENTPD3	O75355	529 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	NEURL1	O76050	574 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CD63	P08962	238 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PCNA	P12004	261 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	INSRR	P14616	1297 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CDA	P32320	146 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	MCM7	P33993	719 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PTGER1	P34995	402 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CLCNKB	P51801	687 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	TERF1	P54274	439 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	SLC18A2	Q05940	514 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PMPCA	Q10713	525 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	FGFBP1	Q14512	234 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PGM5	Q15124	567 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ALG11	Q2TAA5	492 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	COL28A1	Q2UY09	1125 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	SYTL3	Q4VX76	610 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ALG10	Q5BKT4	473 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ALG10B	Q5I7T1	473 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PRAMEF17	Q5VTA0	474 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	IGFL4	Q6B9Z1	124 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CES5A	Q6NT32	575 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	RPUSD3	Q6P087	351 aa	Known RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	AAGAB	Q6PD74	315 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	DHX40	Q8IX18	779 aa	Known RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CADM3	Q8N126	398 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	POC5	Q8NA72	575 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	KCTD6	Q8NC69	237 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	OSR1	Q8TAX0	266 aa	Predicted RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PGAM5	Q96HS1	289 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PRAM1	Q96QH2	718 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	SIN3A	Q96ST3	1273 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	KLK15	Q9H2R5	256 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	MOV10	Q9HCE1	1003 aa	Known RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	SH3GLB2	Q9NR46	395 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PLK2	Q9NYY3	685 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.56	□□□□□ -1.68
XPA-203	ENST00000485042	NENF	Q9UMX5	172 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CARD8	Q9Y2G2	431 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	ZNF711	Q9Y462	761 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	CEP350	Q5VT06	3117 aa		4.56	□□□□□ -1.68
XPA-203	ENST00000485042	PARP4	Q9UKK3	1724 aa	Known RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	ARHGEF10	O15013	1369 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	AOX1	Q06278	1338 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	NPIPB11	E5RHQ5	1161 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	C1QTNF3-AMACR	E9PGA6	284 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	RHOD	O00212	210 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	RNMT	O43148	476 aa	Known RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	NDUFS3	O75489	264 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	SLC25A12	O75746	678 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	MT-CYB	P00156	380 aa	Predicted RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	LCK	P06239	509 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	NHLRC4	P0CG21	123 aa	Predicted RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	IL7R	P16871	459 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	GABRB1	P18505	474 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	PIK3CA	P42336	1068 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	RRP1	P56182	461 aa	Known RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	CLDN2	P57739	230 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	OLIG2	Q13516	323 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	PLCB4	Q15147	1175 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	NTRK2	Q16620	822 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	CCDC184	Q52MB2	194 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	LRRC8E	Q6NSJ5	796 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	TRIM74	Q86UV6	250 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	TRIM73	Q86UV7	250 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	ZCCHC9	Q8N567	271 aa	Known RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	DPP10	Q8N608	796 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	CMAS	Q8NFW8	434 aa	Predicted RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	LARP4B	Q92615	738 aa	Known RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	SARAF	Q96BY9	339 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	APOL6	Q9BWW8	343 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	ABI3	Q9P2A4	366 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	CPSF2	Q9P2I0	782 aa	Known RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	FBXL17	Q9UF56	701 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	CNOT8	Q9UFF9	292 aa	Known RBP	4.55	□□□□□ -1.68
XPA-203	ENST00000485042	PACSIN3	Q9UKS6	424 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	FAM169A	Q9Y6X4	670 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	PEAK1	Q9H792	1746 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	SPATA31E1	Q6ZUB1	1445 aa		4.55	□□□□□ -1.68
XPA-203	ENST00000485042	KIAA0232	Q92628	1395 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042	UTY	O14607	1347 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042		A0A096LPK6	155 aa		4.54	□□□□□ -1.68
XPA-203	ENST00000485042		H7C0S8	307 aa		4.54	□□□□□ -1.68

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