RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ELMO2Q96JJ3 720 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 CLPTM1LQ96KA5 538 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 LBHD1Q9BQE6 289 aaPredicted RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 C1QTNF1Q9BXJ1 281 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 TASP1Q9H6P5 420 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 ARNT2Q9HBZ2 717 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 TLR9Q9NR96 1032 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 PNPOQ9NVS9 261 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 FCF1Q9Y324 198 aaKnown RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 A0A1B0GVM2 712 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 TCAF2A6NFQ2 919 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 G3V2L1 256 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 KIAA0355O15063 1070 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 CCL16O15467 120 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 TIMM44O43615 452 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 SIN3BO75182 1162 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 SKAP2O75563 359 aaPredicted RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 IDH3AP50213 366 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 COPAP53621 1224 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 SEMA3AQ14563 771 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 NECAB2Q7Z6G3 386 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 UBE2Q1Q7Z7E8 422 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 PIM3Q86V86 326 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 TMEM151AQ8N4L1 468 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 RIN3Q8TB24 985 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 OVCA2Q8WZ82 227 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 CDK5RAP1Q96SZ6 601 aaKnown RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 CINPQ9BW66 212 aaPredicted RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 VPS45Q9NRW7 570 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 UBA2Q9UBT2 640 aaPredicted RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 CCL26Q9Y258 94 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 HEATR9A2RTY3 570 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 EIF4E1BA6NMX2 242 aaKnown RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 H0Y626 953 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 CLDN11O75508 207 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 CXCL14O95715 111 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 ANPEPP15144 967 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 GKP32189 559 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 RFC2P35250 354 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 CYTH1Q15438 398 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 ATXN7L2Q5T6C5 722 aaPredicted RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 PLPP4Q5VZY2 271 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 RPS27LQ71UM5 84 aaKnown RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 MAVSQ7Z434 540 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 CNTN4Q8IWV2 1026 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 BBS7Q8IWZ6 715 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 OR6Y1Q8NGX8 325 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 NXNL1Q96CM4 212 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 PPP1R36Q96LQ0 422 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 ZNF184Q99676 751 aaPredicted RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 CORO1BQ9BR76 489 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 TM6SF2Q9BZW4 377 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 MAGEH1Q9H213 219 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 NEMP2A6NFY4 417 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 FKBP6O75344 327 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 MPOP05164 745 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 C8AP07357 584 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 MYOGP15173 224 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 CSE1LP55060 971 aaKnown RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 USP4Q13107 963 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 KIAA0930Q6ICG6 404 aaPredicted RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 APCDD1Q8J025 514 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 C2CD4AQ8NCU7 369 aaPredicted RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 SREK1Q8WXA9 508 aaKnown RBP14.5□□□□□ -0.09
CHD3-211ENST00000481999 TCF25Q9BQ70 676 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 MGME1Q9BQP7 344 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 VCXQ9H320 206 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 NMRAL1Q9HBL8 299 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 NDE1Q9NXR1 346 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.5□□□□□ -0.09
CHD3-211ENST00000481999 PCDHB12Q9Y5F1 795 aa14.5□□□□□ -0.09
CHD3-211ENST00000481999 A0A088AWK7 358 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 MROH6A6NGR9 719 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 MEI4A8MW99 385 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 KDELR3O43731 214 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 PRLP01236 227 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 CHRNGP07510 517 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 SERPINF2P08697 491 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 CSKP41240 450 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 CSRP3P50461 194 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 FSTL5Q8N475 847 aaPredicted RBP14.49□□□□□ -0.09
CHD3-211ENST00000481999 MYLIPQ8WY64 445 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 RMDN1Q96DB5 314 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 CMTM5Q96DZ9 223 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 TCEAL4Q96EI5 215 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 PSKH2Q96QS6 385 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 VPS28Q9UK41 221 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 RUVBL2Q9Y230 463 aaKnown RBP14.49□□□□□ -0.09
CHD3-211ENST00000481999 DPPA5A6NC42 116 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 AP3B1O00203 1094 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 ZNF195O14628 629 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 TMCC1O94876 653 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 PRAMEF12O95522 483 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 LINGO3P0C6S8 592 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 CTSAP10619 480 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 CDKN1CP49918 316 aaPredicted RBP14.49□□□□□ -0.09
CHD3-211ENST00000481999 PRAMEP78395 509 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 TMEM154Q6P9G4 183 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms