RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SDR16C5Q8N3Y7 309 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 Q8N9G6 341 aaPredicted RBP17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 HCAR2Q8TDS4 363 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 FCRL3Q96P31 734 aaPredicted RBP17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 PSKH2Q96QS6 385 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 EIF3CQ99613 913 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 FOXP3Q9BZS1 431 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 TMEM168Q9H0V1 697 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 CYP4F12Q9HCS2 524 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 EVA1BQ9NVM1 165 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 CAPN11Q9UMQ6 739 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 A0A1W2PQJ5 194 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 B4DGG1 531 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 GOLGA6L19H0YKK7 550 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 TNFP01375 233 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 CYP1A2P05177 515 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ALPIP09923 528 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 CR2P20023 1033 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 LHCGRP22888 699 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 IL4RP24394 825 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 HTR1BP28222 390 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 SUOXP51687 545 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 TAS2R40P59535 323 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 CXADRP78310 365 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 CCL7P80098 99 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ZBED6P86452 979 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ITKQ08881 620 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 RFTN1Q14699 578 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ELOCQ15369 112 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ESRP1Q6NXG1 681 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ALKBH5Q6P6C2 394 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 HSD11B1LQ7Z5J1 315 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ZNF564Q8TBZ8 553 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 XPO4Q9C0E2 1151 aaKnown RBP17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 USP29Q9HBJ7 922 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 CPNE5Q9HCH3 593 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 IP6K2Q9UHH9 426 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 CD84Q9UIB8 345 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 ATXN7L1Q9ULK2 861 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 TTLL3Q9Y4R7 772 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 MGAQ8IWI9 3026 aa17.43■□□□□ 0.38
ECHDC1-216ENST00000479525 NPIPB15A6NHN6 443 aaPredicted RBP17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 PDHA1P08559 390 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 ETV3P41162 512 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 MMP13P45452 471 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 PEX5P50542 639 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 AP1S1P61966 158 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 NSUN2Q08J23 767 aaKnown RBP eCLIP17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 PIGHQ14442 188 aaPredicted RBP17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 IHHQ14623 411 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 BOLA3Q53S33 107 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 RBM44Q6ZP01 1051 aaKnown RBP17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 TAF8Q7Z7C8 310 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 CACTIN-AS1Q8N1I8 211 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 LZTR1Q8N653 840 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 OR56A4Q8NGH8 313 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 GLMNQ92990 594 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 NUS1Q96E22 293 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 NUDCD1Q96RS6 583 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 PRORYQ9H606 182 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 POLR1BQ9H9Y6 1135 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 ASCL3Q9NQ33 180 aa17.42■□□□□ 0.38
ECHDC1-216ENST00000479525 CACNB4O00305 520 aaPredicted RBP17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 HGFP14210 728 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 VIPR1P32241 457 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 POLD2P49005 469 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 RPIAP49247 311 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 BLKP51451 505 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 RENBPP51606 427 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 TLE3Q04726 772 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 SPIDRQ14159 915 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 DPYSL3Q14195 570 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 ZSCAN23Q3MJ62 389 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 NCBP2-AS2Q69YL0 99 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 PNCKQ6P2M8 343 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 DOK6Q6PKX4 331 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 GKN2Q86XP6 184 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 FSTL5Q8N475 847 aaPredicted RBP17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 ARL10Q8N8L6 244 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 FAM46DQ8NEK8 389 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 PRR11Q96HE9 360 aaPredicted RBP17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 COQ10AQ96MF6 247 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 ZNF599Q96NL3 588 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 MGME1Q9BQP7 344 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 EPB41L5Q9HCM4 733 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 CTTNBP2NLQ9P2B4 639 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 LUC7L2Q9Y383 392 aaKnown RBP17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 BAHCC1Q9P281 2608 aa17.41■□□□□ 0.38
ECHDC1-216ENST00000479525 A0A1W2PQM1 296 aa17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 HTRA2O43464 458 aaPredicted RBP17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 FUCA1P04066 466 aa17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 RPLP0P05388 317 aaKnown RBP17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 AK4P27144 223 aaPredicted RBP17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 LSSP48449 732 aa17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 PCBP4P57723 403 aaKnown RBP17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 DSC2Q02487 901 aa17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 ACAP1Q15027 740 aa17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 AGERQ15109 404 aa17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 MARC1Q5VT66 337 aa17.4■□□□□ 0.38
ECHDC1-216ENST00000479525 TRIM74Q86UV6 250 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms