RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 RPS6KL1Q9Y6S9 549 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 ALPK3Q96L96 1907 aa5.01□□□□□ -1.61
SF3B6-202ENST00000478050 GBF1Q92538 1859 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ANKRD36A6QL64 1941 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 SYNJ2BP-COX16A0A087WUM0 186 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ARHGEF37A1IGU5 675 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 C2orf71A6NGG8 1288 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 F5H423 210 aaPredicted RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 H0Y3Z8 333 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 NRP1O14786 923 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 FOXD2O60548 495 aaPredicted RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 FKBP6O75344 327 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ENTPD5O75356 428 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 BEST1O76090 585 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 GSRP00390 522 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 FYNP06241 537 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 THP07101 528 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 SRGAP2BP0DMP2 458 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 KITP10721 976 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 RALBP11234 206 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 CPA3P15088 417 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 BMP7P18075 431 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ACAT1P24752 427 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 DNAJB1P25685 340 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 HSD3B2P26439 372 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 PRDX6P30041 224 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 RPL9P32969 192 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 HTR7P34969 479 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 MLH1P40692 756 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ID4P47928 161 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 PTDSS1P48651 473 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 POLD2P49005 469 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 HARS2P49590 506 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 CXCR3P49682 368 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 NDUFV1P49821 464 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 HK2P52789 917 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ALDH18A1P54886 795 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 ABCE1P61221 599 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 RPS26P62854 115 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 PITX1P78337 314 aaPredicted RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 IRX4P78413 519 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 CRADDP78560 199 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 MRPS35P82673 323 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 MXRA7P84157 204 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 TUBB3Q13509 450 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 THOC5Q13769 683 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 RCN2Q14257 317 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 KPNB1Q14974 876 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 MUM1Q2TAK8 710 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 HSF5Q4G112 596 aaPredicted RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 ANKRD20A4Q4UJ75 823 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 KHDC1Q4VXA5 237 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 ACSBG2Q5FVE4 666 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 PRAMEF19Q5SWL8 479 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 FAM182AQ5T1J6 154 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 SYPL2Q5VXT5 272 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ARMC3Q5W041 872 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 BSPRYQ5W0U4 402 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 CES4AQ5XG92 561 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 KCTD11Q693B1 232 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 NAPEPLDQ6IQ20 393 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 DCLRE1AQ6PJP8 1040 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 LRRC74BQ6ZQY2 392 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 GK5Q6ZS86 529 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ZCCHC23Q6ZST2 131 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 BEND5Q7L4P6 421 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 LINC00523Q86TU6 105 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 TMEM135Q86UB9 458 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 RSPH3Q86UC2 560 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 METTL23Q86XA0 190 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 SCUBE1Q8IWY4 988 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 KLHDC8BQ8IXV7 354 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 UNC5BQ8IZJ1 945 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 DCLK2Q8N568 766 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 DNAAF3Q8N9W5 541 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ARRDC4Q8NCT1 418 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 RBM15BQ8NDT2 890 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 OR52K1Q8NGK4 314 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 RDH11Q8TC12 318 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 DIS3LQ8TF46 1054 aaKnown RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 STON2Q8WXE9 905 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 DNAJC9Q8WXX5 260 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 MIEF2Q96C03 454 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 SHDQ96IW2 340 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 HSPA12BQ96MM6 686 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 TSNARE1Q96NA8 513 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 FCRL3Q96P31 734 aaPredicted RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 TSGA13Q96PP4 275 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 SMOQ99835 787 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ARHGAP39Q9C0H5 1083 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 IL22Q9GZX6 179 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 C11orf49Q9H6J7 331 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ATP13A1Q9HD20 1204 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 PRDM5Q9NQX1 630 aaPredicted RBP5□□□□□ -1.61
SF3B6-202ENST00000478050 C19orf73Q9NVV2 129 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 DDIT4Q9NX09 232 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 COX16Q9P0S2 106 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 ARMCX1Q9P291 453 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 COPG2Q9UBF2 871 aa5□□□□□ -1.61
SF3B6-202ENST00000478050 MARCOQ9UEW3 520 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms