RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PIGKQ92643 395 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CLCC1Q96S66 551 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 ING3Q9NXR8 418 aa18.63■□□□□ 0.57
VARS2-209ENST00000477288 CCL16O15467 120 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 LPOP22079 712 aaPredicted RBP18.62■□□□□ 0.57
VARS2-209ENST00000477288 TAS2R41P59536 307 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 ABATP80404 500 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 QPRTQ15274 297 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 RNASE12Q5GAN4 147 aaKnown RBP18.62■□□□□ 0.57
VARS2-209ENST00000477288 CNPPD1Q9BV87 410 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 CFAP97Q9P2B7 532 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 GIT1Q9Y2X7 761 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 BANF1O75531 89 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 OR1D2P34982 312 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 ZNF846Q147U1 533 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 PSRC1Q6PGN9 363 aaPredicted RBP18.62■□□□□ 0.57
VARS2-209ENST00000477288 GPRIN3Q6ZVF9 776 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 INTS7Q9NVH2 962 aaKnown RBP18.62■□□□□ 0.57
VARS2-209ENST00000477288 ADAM28Q9UKQ2 775 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 PLOD3O60568 738 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 APODP05090 189 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 ASGR1P07306 291 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 MC4RP32245 332 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 NOGQ13253 232 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 PERM1Q5SV97 790 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 FNBP1LQ5T0N5 605 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 CPA6Q8N4T0 437 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 DLG3Q92796 817 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 DSN1Q9H410 356 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 HIPK3Q9H422 1215 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 TMCC2O75069 709 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 ATP5F1P24539 256 aaPredicted RBP18.62■□□□□ 0.57
VARS2-209ENST00000477288 BRCC3P46736 316 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 STK32AQ8WU08 396 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 PMM1Q92871 262 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 PANX1Q96RD7 426 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 SLC28A3Q9HAS3 691 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 SEC24AO95486 1093 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 BROXQ5VW32 411 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 CFAP52Q8N1V2 620 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 KIAA1522Q9P206 1035 aaPredicted RBP18.62■□□□□ 0.57
VARS2-209ENST00000477288 TBC1D30Q9Y2I9 924 aa18.62■□□□□ 0.57
VARS2-209ENST00000477288 TRIM3O75382 744 aaPredicted RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 S100A9P06702 114 aaKnown RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 CYP4B1P13584 511 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 SMIM11AP58511 58 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 RAVER1Q8IY67 606 aaKnown RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 PSMA8Q8TAA3 256 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 LINGO1Q96FE5 620 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 MTMR9Q96QG7 549 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 PSMD13Q9UNM6 376 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 ZNF510Q9Y2H8 683 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 WASP42768 502 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 DGKZQ13574 1117 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 CPSF6Q16630 551 aaKnown RBP eCLIP18.61■□□□□ 0.57
VARS2-209ENST00000477288 POC5Q8NA72 575 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 PLEKHG4BQ96PX9 1271 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 ZNF184Q99676 751 aaPredicted RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 B4GALT5O43286 388 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 COX4I1P13073 169 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 RAB10P61026 200 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 GPR135Q8IZ08 494 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 EPS8L1Q8TE68 723 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 FAM163AQ96GL9 167 aaPredicted RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 SNUPNO95149 360 aaKnown RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 UGT1A5P35504 534 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 PLPPR4Q7Z2D5 763 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 FBXW8Q8N3Y1 598 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 OR52K2Q8NGK3 314 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 RNF157Q96PX1 679 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 SAR1AQ9NR31 198 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 MORF4L1Q9UBU8 362 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 ARHGEF28Q8N1W1 1705 aaKnown RBP18.61■□□□□ 0.57
VARS2-209ENST00000477288 OTCP00480 354 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 HGFP14210 728 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 PCBP1Q15365 356 aaKnown RBP eCLIP18.61■□□□□ 0.57
VARS2-209ENST00000477288 MPPE1Q53F39 396 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 ATG14Q6ZNE5 492 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 PJA1Q8NG27 643 aa18.61■□□□□ 0.57
VARS2-209ENST00000477288 MAGEB3O15480 346 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 PSMD10O75832 226 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 LYNP07948 512 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 ADSSP30520 456 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 BNC1Q01954 994 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 DDR1Q08345 913 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 PHYKPLQ8IUZ5 450 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 DEPDC4Q8N2C3 294 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 C2orf73Q8N5S3 287 aaPredicted RBP18.6■□□□□ 0.57
VARS2-209ENST00000477288 C12orf29Q8N999 325 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 ACTL7BQ9Y614 415 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 TGFBR2P37173 567 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 PSMD8P48556 350 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 CASP5P51878 434 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 PSME3P61289 254 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 UBAP2LQ14157 1087 aaKnown RBP18.6■□□□□ 0.57
VARS2-209ENST00000477288 KLHL35Q6PF15 583 aa18.6■□□□□ 0.57
VARS2-209ENST00000477288 NETO2Q8NC67 525 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms