RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 LSP1P33241 339 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 GJA4P35212 333 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 OPRD1P41143 372 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 EIF2DP41214 584 aaKnown RBP13.77□□□□□ -0.21
TRAF4-210ENST00000475329 CD151P48509 253 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 TMPRSS15P98073 1019 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 MPP1Q00013 466 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 MPP2Q14168 576 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 PTPRNQ16849 979 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 ITPRIPL2Q3MIP1 535 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 PREPLQ4J6C6 727 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-210ENST00000475329 FNDC3BQ53EP0 1204 aaKnown RBP13.77□□□□□ -0.21
TRAF4-210ENST00000475329 AFTPHQ6ULP2 937 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 SH2D5Q6ZV89 423 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 GALNT7Q86SF2 657 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 ZC3HC1Q86WB0 502 aaKnown RBP13.77□□□□□ -0.21
TRAF4-210ENST00000475329 DENND6AQ8IWF6 608 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 NDUFAF2Q8N183 169 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 PHTF2Q8N3S3 785 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 TERB1Q8NA31 727 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 KDM1BQ8NB78 822 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 OR4K2Q8NGD2 314 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 OR13C4Q8NGS5 318 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 DYDC1Q8WWB3 177 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 SUSD6Q92537 303 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 ISL2Q96A47 359 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 ECHDC3Q96DC8 303 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 ATXN7L3BQ96GX2 97 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 TBATAQ96M53 351 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 SMIM14Q96QK8 99 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 HEPHQ9BQS7 1158 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 SUV39H2Q9H5I1 410 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 PCMTD2Q9NV79 361 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 PHTF1Q9UMS5 762 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 CCDC162PA2VCL2 907 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 CAPN8A6NHC0 703 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 SRRM3A6NNA2 597 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 AURKAO14965 403 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 STX7O15400 261 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 GOT2P00505 430 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 ALDOAP04075 364 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 UGT2B4P06133 528 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 ALPIP09923 528 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 OGNP20774 298 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 RPA3P35244 121 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 NEK3P51956 506 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 CTBP1Q13363 440 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 HTR4Q13639 388 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 PTPRCAPQ14761 206 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 SEPT7Q16181 437 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 FSTL4Q6MZW2 842 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 MRNIPQ6NTE8 343 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 GDPD4Q6W3E5 623 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 USP45Q70EL2 814 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 PTAR1Q7Z6K3 402 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 CHST14Q8NCH0 376 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 GPR150Q8NGU9 434 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 TTC8Q8TAM2 541 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 GRIN3AQ8TCU5 1115 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 UCMAQ8WVF2 138 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 GPR22Q99680 433 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 OSBPL1AQ9BXW6 950 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 GPR63Q9BZJ6 419 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 IQCGQ9H095 443 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 CATSPERZQ9NTU4 200 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 GTSE1Q9NYZ3 720 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 PLA2G4CQ9UP65 541 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 MTO1Q9Y2Z2 717 aaKnown RBP13.76□□□□□ -0.21
TRAF4-210ENST00000475329 PKP3Q9Y446 797 aa13.76□□□□□ -0.21
TRAF4-210ENST00000475329 PLXNB3Q9ULL4 1909 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 OR51F1A6NGY5 319 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 PRRT4C9JH25 899 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 CD3EAPO15446 510 aaKnown RBP13.75□□□□□ -0.21
TRAF4-210ENST00000475329 AHSGP02765 367 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 F7P08709 466 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-210ENST00000475329 SP100P23497 879 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-210ENST00000475329 MAGEA12P43365 314 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 ABCG1P45844 678 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 POLD2P49005 469 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 CLCN5P51795 746 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 MESP2Q0VG99 397 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 LRRC14Q15048 493 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 HHATQ5VTY9 493 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 LYSMD3Q7Z3D4 306 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 TAX1BP1Q86VP1 789 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 CILP2Q8IUL8 1156 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 OR4L1Q8NH43 312 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 TCP10LQ8TDR4 215 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 DENND1AQ8TEH3 1009 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
TRAF4-210ENST00000475329 VOPP1Q96AW1 172 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 CDKN2AIPNLQ96HQ2 116 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 LRIG1Q96JA1 1093 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms