RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PTCD3Q96EY7 689 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 C12orf42Q96LP6 360 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PPP1R10Q96QC0 940 aaKnown RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 HAPLN3Q96S86 360 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MYADMQ96S97 322 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MECRQ9BV79 373 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MLST8Q9BVC4 326 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CINPQ9BW66 212 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 VN1R3Q9BXE9 311 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 IDI2Q9BXS1 227 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TRIM4Q9C037 500 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TWSG1Q9GZX9 223 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ARRDC1-AS1Q9H2J1 176 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SLC32A1Q9H598 525 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TLE6Q9H808 572 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 PLEKHA2Q9HB19 425 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 USP29Q9HBJ7 922 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GALNT9Q9HCQ5 603 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 G6PC2Q9NQR9 355 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 FSCN3Q9NQT6 498 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ARHGEF3Q9NR81 526 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 INTS13Q9NVM9 706 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 TMEM160Q9NX00 188 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 KCNE5Q9UJ90 142 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SLC25A13Q9UJS0 675 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 VPS28Q9UK41 221 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ZHX1Q9UKY1 873 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 HSF4Q9ULV5 492 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SLC12A4Q9UP95 1085 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GPR34Q9UPC5 381 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 GDAQ9Y2T3 454 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MAP3K2Q9Y2U5 619 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 UBE2J1Q9Y385 318 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 PCDHGA5Q9Y5G8 931 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ENTPD2Q9Y5L3 495 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 SNX14Q9Y5W7 946 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 CACNA1EQ15878 2313 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MTORP42345 2549 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 KIF26AQ9ULI4 1882 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 NUP205Q92621 2012 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MGAQ8IWI9 3026 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 MUC22E2RYF6 1773 aaPredicted RBP2.49□□□□□ -2.01
CALD1-216ENST00000473714 ZMYM2Q9UBW7 1377 aa2.49□□□□□ -2.01
CALD1-216ENST00000473714 ADAMTS9Q9P2N4 1935 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 MYH15Q9Y2K3 1946 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 UTP20O75691 2785 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 GRID2IPA4D2P6 1211 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM90A18PA6NE21 464 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM90A16PA6NEW6 464 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM90A9PA6NNJ1 464 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM90A5PA8MXJ8 464 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 F5H0A9 414 aaPredicted RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 GTPBP1O00178 669 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 RNASET2O00584 256 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 SYN3O14994 580 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 ZNF185O15231 689 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CCNT1O60563 726 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 FRAT2O75474 233 aaPredicted RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 NDUFA10O95299 355 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 VNN1O95497 513 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 PGK2P07205 417 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 FESP07332 822 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 PDHA1P08559 390 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CNPP09543 421 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 DLDP09622 509 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM90A15PP0C7V4 464 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM90A14PP0C7W9 464 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 NR4A1P22736 598 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 RPS6KB1P23443 525 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 ITPKBP27987 946 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 STAT1P42224 750 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 RPS9P46781 194 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 CPA2P48052 419 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 TOB1P50616 345 aaPredicted RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 RCAN1P53805 252 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 RARSP54136 660 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 CDH15P55291 814 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 TPTEP56180 551 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SNX16P57768 344 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 TIRAPP58753 221 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 DCAF7P61962 342 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CXADRP78310 365 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 POU5F1Q01860 360 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 PRPF4BQ13523 1007 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 DCTN2Q13561 401 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 ACVR2BQ13705 512 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CLCA4Q14CN2 919 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 WTAPQ15007 396 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 PSMD6Q15008 389 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 TBCCQ15814 346 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 PDCD4Q53EL6 469 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM133BQ5BKY9 247 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 RABL3Q5HYI8 236 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 WDR45BQ5MNZ6 344 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CBWD5Q5RIA9 395 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 GPATCH4Q5T3I0 446 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 FAM102AQ5T9C2 384 aaPredicted RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 TEDDM1Q5T9Z0 273 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 ANO7Q6IWH7 933 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 MSANTD2Q6P1R3 559 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms