RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ISM2Q6H9L7 571 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 CPLX2Q6PUV4 134 aaKnown RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 TECPR1Q7Z6L1 1165 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 PIP4P1Q86T03 277 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 GALNT13Q8IUC8 556 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 DHX40Q8IX18 779 aaKnown RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 KIAA2013Q8IYS2 634 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 MMP21Q8N119 569 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 SYT2Q8N9I0 419 aaPredicted RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 AVL9Q8NBF6 648 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 PGAP3Q96FM1 320 aaPredicted RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 VCPIP1Q96JH7 1222 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 BBS4Q96RK4 519 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 ABHD1Q96SE0 405 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 HIPK3Q9H422 1215 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 ACTR5Q9H9F9 607 aaPredicted RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 DECR2Q9NUI1 292 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 TAB2Q9NYJ8 693 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 WSB2Q9NYS7 404 aaPredicted RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 OGFRQ9NZT2 677 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 CPSF2Q9P2I0 782 aaKnown RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 SEC63Q9UGP8 760 aaKnown RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 AGO2Q9UKV8 859 aaKnown RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 NENFQ9UMX5 172 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 FAM96BQ9Y3D0 163 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.3□□□□□ -1.72
SMC4-208ENST00000467468 SQORQ9Y6N5 450 aa4.3□□□□□ -1.72
SMC4-208ENST00000467468 PAPSS1O43252 624 aaPredicted RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 SEC14L5O43304 696 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 HS6ST1O60243 411 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 TBCAO75347 108 aaKnown RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 SLC25A12O75746 678 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 NEURL1O76050 574 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 NFATC1O95644 943 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 QDPRP09417 244 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 TMEM11P17152 192 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 KLRC2P26717 231 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 CAMPP49913 170 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 UBXN2AP68543 259 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 BAATQ14032 418 aaPredicted RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 PGM5Q15124 567 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 COL28A1Q2UY09 1125 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 SYTL3Q4VX76 610 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 MANEAQ5SRI9 462 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 CFAP77Q6ZQR2 320 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 COLCA1Q6ZS62 124 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 KDELC2Q7Z4H8 507 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 GALNTL5Q7Z4T8 443 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 IRF2BP2Q7Z5L9 587 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 SLFN11Q7Z7L1 901 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 TBC1D26Q86UD7 250 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 TRIM74Q86UV6 250 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 TRIM73Q86UV7 250 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 CCDC25Q86WR0 208 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 TDRPQ86YL5 185 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 CADM3Q8N126 398 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 ARL14EPQ8N8R7 260 aaPredicted RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 POGLUT1Q8NBL1 392 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 KAT2AQ92830 837 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 CLMNQ96JQ2 1002 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 SPATA17Q96L03 361 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 NLRP4Q96MN2 994 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 GCNAQ96QF7 691 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 OR2A14Q96R47 310 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 SRSF8Q9BRL6 282 aaKnown RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 NUF2Q9BZD4 464 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 KLHL4Q9C0H6 718 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 ZNF304Q9HCX3 659 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 RANGRFQ9HD47 186 aaPredicted RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 MRGBPQ9NV56 204 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 C5AR2Q9P296 337 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 CNOT8Q9UFF9 292 aaKnown RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 PADI1Q9ULC6 663 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 PTRH2Q9Y3E5 179 aaKnown RBP4.29□□□□□ -1.72
SMC4-208ENST00000467468 CCL27Q9Y4X3 112 aa4.29□□□□□ -1.72
SMC4-208ENST00000467468 ZNF644Q9H582 1327 aaPredicted RBP4.28□□□□□ -1.72
SMC4-208ENST00000467468 KIR2DS5A0A0G2JLQ3 304 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 B4DGG1 531 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 KIR2DS3K7RE56 304 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 INSIG1O15503 277 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 RNMTO43148 476 aaKnown RBP4.28□□□□□ -1.72
SMC4-208ENST00000467468 TLX3O43711 291 aaPredicted RBP4.28□□□□□ -1.72
SMC4-208ENST00000467468 TMCC1O94876 653 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 NKX2-2O95096 273 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 AFPP02771 609 aaKnown RBP4.28□□□□□ -1.72
SMC4-208ENST00000467468 SRPRAP08240 638 aaKnown RBP4.28□□□□□ -1.72
SMC4-208ENST00000467468 SNHG28P0DPA3 235 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 PSG1P11464 419 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 PCNAP12004 261 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 SCG2P13521 617 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 CTPS1P17812 591 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 ITGAXP20702 1163 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 MCCP23508 829 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 PON1P27169 355 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 CTNNA1P35221 906 aaKnown RBP4.28□□□□□ -1.72
SMC4-208ENST00000467468 CAPZA2P47755 286 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 ZNF41P51814 821 aaPredicted RBP4.28□□□□□ -1.72
SMC4-208ENST00000467468 STAT2P52630 851 aa4.28□□□□□ -1.72
SMC4-208ENST00000467468 IKQ13123 557 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms