RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 KCNC4Q03721 635 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF235Q14590 738 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 CDKN3Q16667 212 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 HADHQ16836 314 aaKnown RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 ISXQ2M1V0 245 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 ASTE1Q2TB18 679 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 TBC1D25Q3MII6 688 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 MARC1Q5VT66 337 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 ESRP1Q6NXG1 681 aaKnown RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 OGFOD3Q6PK18 319 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 ENPP7Q6UWV6 458 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 HID1Q8IV36 788 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 BBS5Q8N3I7 341 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 PLA2G15Q8NCC3 412 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 ANKK1Q8NFD2 765 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 TSACCQ96A04 125 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 FUBP1Q96AE4 644 aaKnown RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 SCRN2Q96FV2 425 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 HIC2Q96JB3 615 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 BTBD6Q96KE9 485 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 COQ10AQ96MF6 247 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 WDR92Q96MX6 357 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF578Q96N58 590 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 TSGA13Q96PP4 275 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 RBM15Q96T37 977 aaKnown RBP eCLIP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 NOD2Q9HC29 1040 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 UVRAGQ9P2Y5 699 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 LCMT1Q9UIC8 334 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 PADI4Q9UM07 663 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 PHTF1Q9UMS5 762 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 OR1A2Q9Y585 309 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 PCDHB1Q9Y5F3 818 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 PCDHGC4Q9Y5F7 938 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.19□□□□□ -0.947e-6■■□□□ 12.1
BRCA1-207ENST00000461798 ADAMTS20P59510 1910 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 TMEM202A6NGA9 273 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PSMD11O00231 422 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 CACNB4O00305 520 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 NTN3O00634 580 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 RRP8O43159 456 aaKnown RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 FZD6O60353 706 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 TDRD6O60522 2096 aaKnown RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 USP12O75317 370 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PROSCO94903 275 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 HEXIM1O94992 359 aaKnown RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 TPM3P06753 285 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 CELA2BP08218 269 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 H2AFZP0C0S5 128 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ELFN1P0C7U0 828 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 CTSEP14091 401 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 CES1P23141 567 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 NFKBIAP25963 317 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 TEAD1P28347 426 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 MMP13P45452 471 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ABCG1P45844 678 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ERVPABLB-1P60509 514 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 GALNT2Q10471 571 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 DPYSL3Q14195 570 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ITPR1Q14643 2758 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PAFAH1B3Q15102 231 aaKnown RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PDK2Q15119 407 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 SLC18A3Q16572 532 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 SKOR2Q2VWA4 1001 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ZSCAN23Q3MJ62 389 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 SOWAHCQ53LP3 525 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ALG1LQ6GMV1 187 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PNCKQ6P2M8 343 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 LRRC69Q6ZNQ3 347 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 H2AFVQ71UI9 128 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 NLRP8Q86W28 1048 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 GKN2Q86XP6 184 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ATPAF2Q8N5M1 289 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ARL10Q8N8L6 244 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 GPR156Q8NFN8 814 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 OR6C4Q8NGE1 309 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 OR8K1Q8NGG5 319 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 OR56A4Q8NGH8 313 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PCDH19Q8TAB3 1148 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 MAML1Q92585 1016 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 FAF2Q96CS3 445 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 MCCC1Q96RQ3 725 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PRORYQ9H606 182 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 POLR1BQ9H9Y6 1135 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 B4GALT6Q9UBX8 382 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 KLQ9UEF7 1012 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 AMACRQ9UHK6 382 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 PCDHGA8Q9Y5G5 932 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 WDFY3Q8IZQ1 3526 aa9.18□□□□□ -0.94
BRCA1-207ENST00000461798 ATRXP46100 2492 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 A0A1W2PNU3 283 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 SSU72P8A0A1W2PR75 194 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 MATN3O15232 486 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms