RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 DPYSL5Q9BPU6 564 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 CYP4F12Q9HCS2 524 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 FGF22Q9HCT0 170 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 MRPL40Q9NQ50 206 aaKnown RBP17.3■□□□□ 0.36
TOP3A-202ENST00000461127 DNAI1Q9UI46 699 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 VPS4AQ9UN37 437 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 TMEM202A6NGA9 273 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 DUX1O43812 170 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 KRT7P08729 469 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 RHOQP17081 205 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 SCNN1AP37088 669 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 NOP2P46087 812 aaKnown RBP17.29■□□□□ 0.36
TOP3A-202ENST00000461127 LIG3P49916 1009 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
TOP3A-202ENST00000461127 MLLT10P55197 1068 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 MAZP56270 477 aaKnown RBP17.29■□□□□ 0.36
TOP3A-202ENST00000461127 NR1D2Q14995 579 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 UGP2Q16851 508 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 HSP90AA4PQ58FG1 418 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 FAM129CQ86XR2 697 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 ZDHHC1Q8WTX9 485 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 PCDH12Q9NPG4 1184 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 SAMSN1Q9NSI8 373 aaKnown RBP17.29■□□□□ 0.36
TOP3A-202ENST00000461127 NDFIP2Q9NV92 336 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 TMEM248Q9NWD8 314 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 OR12D3Q9UGF7 316 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 DAAM1Q9Y4D1 1078 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 ANKRD36A6QL64 1941 aa17.29■□□□□ 0.36
TOP3A-202ENST00000461127 EFCAB7A8K855 629 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 B4E171 279 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 PDE2AO00408 941 aaPredicted RBP17.28■□□□□ 0.36
TOP3A-202ENST00000461127 KDELR3O43731 214 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 CD1CP29017 333 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 MAN1A1P33908 653 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 TSPAN7P41732 249 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 STAT1P42224 750 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 GRM3Q14832 879 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 INO80DQ53TQ3 878 aaPredicted RBP17.28■□□□□ 0.36
TOP3A-202ENST00000461127 GJB7Q6PEY0 223 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 TRIM65Q6PJ69 517 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 EFCAB3Q8N7B9 438 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 CCL4L1Q8NHW4 92 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 SSC4DQ8WTU2 575 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 SHC3Q92529 594 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 FUBP1Q96AE4 644 aaKnown RBP17.28■□□□□ 0.36
TOP3A-202ENST00000461127 PDCL3Q9H2J4 239 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 APEX2Q9UBZ4 518 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 PILRAQ9UKJ1 303 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 TP53TG5Q9Y2B4 290 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 CENPEQ02224 2701 aa17.28■□□□□ 0.36
TOP3A-202ENST00000461127 MKRN2OSH3BPM6 223 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 HOXC4P09017 264 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-202ENST00000461127 THRAP10827 490 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 CCNB1P14635 433 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 TCN2P20062 427 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 OAS2P29728 719 aaKnown RBP17.27■□□□□ 0.36
TOP3A-202ENST00000461127 MARSP56192 900 aaKnown RBP17.27■□□□□ 0.36
TOP3A-202ENST00000461127 NRG1Q02297 640 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-202ENST00000461127 ILF3Q12906 894 aaKnown RBP eCLIP17.27■□□□□ 0.364e-6■■■□□ 15.5
TOP3A-202ENST00000461127 PEX6Q13608 980 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 CDKAL1Q5VV42 579 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 KDELC2Q7Z4H8 507 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 NLRP14Q86W24 1093 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 HEATR4Q86WZ0 1026 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 C17orf82Q86X59 251 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-202ENST00000461127 PLA2G15Q8NCC3 412 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 TMEM35BQ8NCS4 154 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 C18orf8Q96DM3 657 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 CRACR2AQ9BSW2 395 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 GSDMCQ9BYG8 508 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 TRIT1Q9H3H1 467 aaKnown RBP17.27■□□□□ 0.36
TOP3A-202ENST00000461127 SUV39H2Q9H5I1 410 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 PRDM8Q9NQV8 689 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 SPATS2LQ9NUQ6 558 aaKnown RBP17.27■□□□□ 0.36
TOP3A-202ENST00000461127 KCTD3Q9Y597 815 aa17.27■□□□□ 0.36
TOP3A-202ENST00000461127 PRSS38A1L453 326 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 CFAP69A5D8W1 941 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 PIGNO95427 931 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 TPM2P07951 284 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 EEF1GP26641 437 aaKnown RBP17.26■□□□□ 0.35
TOP3A-202ENST00000461127 FLT3P36888 993 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 MMP12P39900 470 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 MTIF2P46199 727 aaKnown RBP17.26■□□□□ 0.35
TOP3A-202ENST00000461127 PPM1FP49593 454 aaPredicted RBP17.26■□□□□ 0.35
TOP3A-202ENST00000461127 ABHD18Q0P651 414 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 CRTC2Q53ET0 693 aaPredicted RBP17.26■□□□□ 0.35
TOP3A-202ENST00000461127 ANKS6Q68DC2 871 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 SMYD5Q6GMV2 418 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 C16orf46Q6P387 395 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 BRAT1Q6PJG6 821 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 STARD8Q92502 1023 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 CFAP57Q96MR6 1250 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 WDR26Q9H7D7 661 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 PLCB1Q9NQ66 1216 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 OCIAD1Q9NX40 245 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 ATP8A1Q9Y2Q0 1164 aa17.26■□□□□ 0.35
TOP3A-202ENST00000461127 LOC101059948A0A1B0GTJ6 334 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms