RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 FARP1Q9Y4F1 1045 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 A0A096LPK6 155 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 HS6ST1O60243 411 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SUPT7LO94864 414 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ANXA6P08133 673 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 MAPK1P28482 360 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 GRIA3P42263 894 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PTPN9P43378 593 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 NEK3P51956 506 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 OLR1P78380 273 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 CACNB2Q08289 660 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 COX10Q12887 443 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SLC26A9Q7LBE3 791 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SERINC5Q86VE9 423 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PSTKQ8IV42 348 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PIK3C3Q8NEB9 887 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 CDC26Q8NHZ8 85 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ZNF670Q9BS34 389 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ERVK-5Q9HDB9 667 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 FLRT1Q9NZU1 646 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 RAB23Q9ULC3 237 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 RBMX2Q9Y388 322 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 A0A1W2PPM1 405 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 F5H423 210 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PIRO00625 290 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 RECQL5O94762 991 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 EOMESO95936 686 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 POMCP01189 267 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SLC2A3P11169 496 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 UMPSP11172 480 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 NCAM1P13591 858 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ELNP15502 786 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ATP6V1E1P36543 226 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 NPY2RP49146 381 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 GEMP55040 296 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ADIGQ0VDE8 80 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 MAD2L1Q13257 205 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 BICRALQ6AI39 1079 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SDE2Q6IQ49 451 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 GDF6Q6KF10 455 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 MZT2AQ6P582 158 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SYCE2Q6PIF2 218 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ZDHHC24Q6UX98 284 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 STRADAQ7RTN6 431 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 C11orf74Q86VG3 221 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 CENPSQ8N2Z9 138 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 C12orf29Q8N999 325 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 JOSD2Q8TAC2 188 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 LRRC20Q8TCA0 184 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PPP1R13LQ8WUF5 828 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TRIB2Q92519 343 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TOP1MTQ969P6 601 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ACSF2Q96CM8 615 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 RCN3Q96D15 328 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 HSPBAP1Q96EW2 488 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 EGFL8Q99944 293 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SPRTNQ9H040 489 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PCDH12Q9NPG4 1184 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SLC17A7Q9P2U7 560 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 POMPQ9Y244 141 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 AAR2Q9Y312 384 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 UBA6A0AVT1 1052 aaPredicted RBP6.21□□□□□ -1.41
VPS13D-202ENST00000460333 KLF11O14901 512 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 NCAM2O15394 837 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A9O60656 530 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 AVILO75366 819 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 LRCH4O75427 683 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 PIGNO95427 931 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 LRG1P02750 347 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 ENO2P09104 434 aaPredicted RBP6.21□□□□□ -1.41
VPS13D-202ENST00000460333 PABPC1P11940 636 aaKnown RBP6.21□□□□□ -1.41
VPS13D-202ENST00000460333 HOXB8P17481 243 aaPredicted RBP6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A6P19224 532 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 ITIH1P19827 911 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A1P22309 533 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A4P22310 534 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 FOXN2P32314 431 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A3P35503 534 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A5P35504 534 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 HARS2P49590 506 aaKnown RBP6.21□□□□□ -1.41
VPS13D-202ENST00000460333 MLLT1Q03111 559 aaPredicted RBP6.21□□□□□ -1.41
VPS13D-202ENST00000460333 SOWAHAQ2M3V2 549 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 THAP5Q7Z6K1 395 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 PIGZQ86VD9 579 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 HPS6Q86YV9 775 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 LRRC17Q8N6Y2 441 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 RNF148Q8N7C7 305 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 VPS37AQ8NEZ2 397 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 OR2T34Q8NGX1 318 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 OR2T3Q8NH03 318 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 NKD2Q969F2 451 aaPredicted RBP6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A7Q9HAW7 530 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A10Q9HAW8 530 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 UGT1A8Q9HAW9 530 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 LRRC4CQ9HCJ2 640 aa6.21□□□□□ -1.41
VPS13D-202ENST00000460333 A0A0J9YVX5 310 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 C2CD4BA6NLJ0 364 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CENPBD1B2RD01 187 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PTGES3LE9PB15 166 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms