RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CCDC151A5D8V7 595 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 PRR23AA6NEV1 266 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 SPECC1L-ADORA2AF8WAN1 911 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 TSPAN6O43657 245 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 DLDP09622 509 aaKnown RBP10.39□□□□□ -0.75
USP39-210ENST00000459775 MGAT1P26572 445 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 MAGEA6P43360 314 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 METAP1P53582 386 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 TRAF2Q12933 501 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 SLC12A1Q13621 1099 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 UAP1Q16222 522 aaPredicted RBP10.39□□□□□ -0.75
USP39-210ENST00000459775 HIF1AQ16665 826 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 LRRC73Q5JTD7 316 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 DENND5AQ6IQ26 1287 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 C22orf39Q6P5X5 142 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 DPY19L3Q6ZPD9 716 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 SPATA21Q7Z572 469 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 CACUL1Q86Y37 369 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 ZBED8Q8IZ13 594 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 OR2W6PQ8NHA6 318 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 GRIN3AQ8TCU5 1115 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 SCUBE2Q9NQ36 999 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 CHMP2BQ9UQN3 213 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 MYO10Q9HD67 2058 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 GOLGA8CPA6NN73 597 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 A8MX80 341 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 K7EQS6 105 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 ATP9BO43861 1147 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 ACSL3O95573 720 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 EGFP01133 1207 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 PRLP01236 227 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 F7P08709 466 aaPredicted RBP10.39□□□□□ -0.75
USP39-210ENST00000459775 PYGBP11216 843 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 PRKCHP24723 683 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 SLC8A1P32418 973 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 S100A5P33763 92 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 ADRA1AP35348 466 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 ELK3P41970 407 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 PRPSAP1Q14558 356 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 ZNF234Q14588 700 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 SUZ12Q15022 739 aaKnown RBP10.39□□□□□ -0.75
USP39-210ENST00000459775 C2orf27AQ580R0 203 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 UNC5BQ8IZJ1 945 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 DNAAF3Q8N9W5 541 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 TADA1Q96BN2 335 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 ZNF778Q96MU6 729 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 P2RY13Q9BPV8 354 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 TBL1YQ9BQ87 522 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 OSBPL10Q9BXB5 764 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 TXLNGYQ9BZA5 131 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 EPB41L4BQ9H329 900 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 SYBUQ9NX95 663 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 IL1RAPL1Q9NZN1 696 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 HECAQ9UBI9 543 aaPredicted RBP10.39□□□□□ -0.75
USP39-210ENST00000459775 SLC25A13Q9UJS0 675 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 GTF2A1LQ9UNN4 478 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 WDR37Q9Y2I8 494 aa10.39□□□□□ -0.75
USP39-210ENST00000459775 TICRRQ7Z2Z1 1910 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 BUD23O43709 281 aaKnown RBP10.38□□□□□ -0.75
USP39-210ENST00000459775 SASH3O75995 380 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 TPSB2P20231 275 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 DNAJA1P31689 397 aaKnown RBP10.38□□□□□ -0.75
USP39-210ENST00000459775 TIE1P35590 1138 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 IL12RB1P42701 662 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 MNAT1P51948 309 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 RFTN1Q14699 578 aaPredicted RBP10.38□□□□□ -0.75
USP39-210ENST00000459775 PTPRCAPQ14761 206 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 TPSAB1Q15661 275 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 FNDC3BQ53EP0 1204 aaKnown RBP10.38□□□□□ -0.75
USP39-210ENST00000459775 SIRPB2Q5JXA9 342 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 NCEH1Q6PIU2 408 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 RANBP10Q6VN20 620 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 PPP1R21Q6ZMI0 780 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 MILR1Q7Z6M3 343 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 HOOK3Q86VS8 718 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 ZSWIM9Q86XI8 627 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 PNPLA1Q8N8W4 532 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 BBOF1Q8ND07 529 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 OR2A12Q8NGT7 310 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 CFAP36Q96G28 342 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 FSD1LQ9BXM9 530 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 ZDHHC6Q9H6R6 413 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 PLAC1Q9HBJ0 212 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 FAM86C1Q9NVL1 165 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 MTRF1LQ9UGC7 380 aaKnown RBP10.38□□□□□ -0.75
USP39-210ENST00000459775 PLA2G4CQ9UP65 541 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 RAI2Q9Y5P3 530 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 F5P12259 2224 aa10.38□□□□□ -0.75
USP39-210ENST00000459775 PLK4O00444 970 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ANXA9O76027 345 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 INMTO95050 263 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ATP5BP06576 529 aaKnown RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 CTSLP07711 333 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SERPINF2P08697 491 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ATXN1LP0C7T5 689 aaKnown RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 CTPS1P17812 591 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SSTR1P30872 391 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 GRIA2P42262 883 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 MAGEA4P43358 317 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ID4P47928 161 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms