RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CDH7Q9ULB5 785 aa9□□□□□ -0.97
VPS50-207ENST00000458530 HS3ST2Q9Y278 367 aa9□□□□□ -0.97
VPS50-207ENST00000458530 WNT6Q9Y6F9 365 aa9□□□□□ -0.97
VPS50-207ENST00000458530 ZFYVE26Q68DK2 2539 aa9□□□□□ -0.97
VPS50-207ENST00000458530 FASNP49327 2511 aaKnown RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 FAM47DPA6NHR8 397 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 ANHXE9PGG2 379 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 PFDN6O15212 129 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 TM9SF1O15321 606 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 SHOX2O60902 331 aaPredicted RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 ZWINTO95229 277 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 ATP5BP06576 529 aaKnown RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 TPH1P17752 444 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 POLR2EP19388 210 aaKnown RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 SERPINA4P29622 427 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 CD70P32970 193 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 MDH1P40925 334 aaKnown RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 RECQLP46063 649 aaPredicted RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 GRIA4P48058 902 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 POLD2P49005 469 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 EPHB1P54762 984 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 STARD6P59095 220 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 GNGT1P63211 74 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 PRAMEP78395 509 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 OLIG2Q13516 323 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 DHCR24Q15392 516 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 FAM78AQ5JUQ0 283 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 TSTD2Q5T7W7 516 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 LINGO4Q6UY18 593 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 KIAA0408Q6ZU52 694 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 EXOC3L1Q86VI1 746 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 TMEM25Q86YD3 366 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 APCDD1Q8J025 514 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 CPA6Q8N4T0 437 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 ZBTB44Q8NCP5 570 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 PJA1Q8NG27 643 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 WFDC5Q8TCV5 224 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 BRSK1Q8TDC3 778 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 ACMSDQ8TDX5 336 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 STYXQ8WUJ0 223 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 SCG3Q8WXD2 468 aaKnown RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 FGF13Q92913 245 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 MYO19Q96H55 970 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 CABS1Q96KC9 395 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 ZSWIM3Q96MP5 696 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 SPSB2Q99619 263 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 SLC6A16Q9GZN6 736 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 NOD2Q9HC29 1040 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 CHRAC1Q9NRG0 131 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS50-207ENST00000458530 RAI2Q9Y5P3 530 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 CNOT1A5YKK6 2376 aaKnown RBP8.99□□□□□ -0.97
VPS50-207ENST00000458530 SCN8AQ9UQD0 1980 aa8.99□□□□□ -0.97
VPS50-207ENST00000458530 PKD1L2Q7Z442 2459 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 ZCWPW2A0A1B0GU75 182 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 TMEM120BA0PK00 339 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 C2orf81A6NN90 581 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 HEPACAM2A8MVW5 462 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 TRIM49D1C9J1S8 452 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 NRG2O14511 850 aaPredicted RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 MUSKO15146 869 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 SLC7A4O43246 635 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 LILRB5O75023 590 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 FAM155BO75949 473 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 CYP17A1P05093 508 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 DCNP07585 359 aaKnown RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 SRPRAP08240 638 aaKnown RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 ADRB1P08588 477 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 ATXN1LP0C7T5 689 aaKnown RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 NMBRP28336 390 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 HLA-FP30511 346 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 CHRNA4P43681 627 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 DGKGP49619 791 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 GYS2P54840 703 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 ECT2LQ008S8 904 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 IL9RQ01113 521 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 BCL2L1Q07817 233 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 EIF4HQ15056 248 aaKnown RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 TERF2Q15554 542 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 TAF1AQ15573 450 aaPredicted RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 ST3GAL2Q16842 350 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 EML3Q32P44 896 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 FUT11Q495W5 492 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 FAM182AQ5T1J6 154 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 ARMC12Q5T9G4 340 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 C22orf39Q6P5X5 142 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 TRMT10BQ6PF06 316 aaKnown RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 NCEH1Q6PIU2 408 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 PACS1Q6VY07 963 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 TIFABQ6ZNK6 161 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 MTSS1LQ765P7 747 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 KDELC2Q7Z4H8 507 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 GALNT7Q86SF2 657 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 CNTN4Q8IWV2 1026 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 ADGRG2Q8IZP9 1017 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 LPCAT1Q8NF37 534 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 OR2AP1Q8NGE2 309 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 BLOC1S5Q8TDH9 187 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms