RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SPATA22Q8NHS9 363 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZFP28Q8NHY6 868 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SHKBP1Q8TBC3 707 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZSCAN18Q8TBC5 510 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF217Q8TC41 542 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DIS3LQ8TF46 1054 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GIPC2Q8TF65 315 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TWIST2Q8WVJ9 160 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DNAJB3Q8WWF6 145 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYGBQ8WWM9 190 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NDRG1Q92597 394 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 EDEM1Q92611 657 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PEX13Q92968 403 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 EXT2Q93063 718 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FATE1Q969F0 183 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 BORCS5Q969J3 196 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ABTB1Q969K4 478 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MYLPFQ96A32 169 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TUBGCP3Q96CW5 907 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PHF21BQ96EK2 531 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 THAP11Q96EK4 314 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC10A4Q96EP9 437 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CENPNQ96H22 339 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PCED1BQ96HM7 432 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 VPS50Q96JG6 964 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC45A3Q96JT2 553 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 KLHL32Q96NJ5 620 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GPR78Q96P69 363 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPP1R10Q96QC0 940 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYP2S1Q96SQ9 504 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB18Q99592 522 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CIB1Q99828 191 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMOQ99835 787 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 OMDQ99983 421 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCTD14Q9BQ13 255 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACBD6Q9BR61 282 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TINF2Q9BSI4 451 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 BDH2Q9BUT1 245 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADI1Q9BV57 179 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ERVK-6Q9BXR3 956 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SIK2Q9H0K1 926 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMOC2Q9H3U7 446 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HIPK3Q9H422 1215 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ALG9Q9H6U8 611 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GOLGA2P5Q9HBQ8 144 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MID1IP1Q9NPA3 183 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NT5MQ9NPB1 228 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CRTAC1Q9NQ79 661 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ANLNQ9NQW6 1124 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMPRSS4Q9NRS4 437 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 IGSF5Q9NSI5 407 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TREX1Q9NSU2 369 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCM2LQ9NUG4 571 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DDX18Q9NVP1 670 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 INTS10Q9NVR2 710 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM45AQ9NWC5 275 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GALNT8Q9NY28 637 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCDC167Q9P0B6 97 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM9Q9P0T7 183 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACTR3BQ9P1U1 418 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM181Q9P2C4 612 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SEPT3Q9UH03 358 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAGEL2Q9UJ55 1249 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LEF1Q9UJU2 399 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ANAPC2Q9UJX6 822 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 BLOC1S6Q9UL45 172 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF112Q9ULX5 631 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 AURKCQ9UQB9 309 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GIT1Q9Y2X7 761 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 VWA7Q9Y334 891 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NME7Q9Y5B8 376 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRPV2Q9Y5S1 764 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 COMMD10Q9Y6G5 202 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CEPT1Q9Y6K0 416 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DICER1Q9UPY3 1922 aaKnown RBP3.34□□□□□ -1.88
HMGN1P18-201ENST00000457642 TSC2P49815 1807 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 SBF1O95248 1867 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 FNDC1Q4ZHG4 1894 aaPredicted RBP3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 hCG_2014768A0A024R1R8 64 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 CCL15-CCL14A0A0B4J2E2 113 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 A0A0J9YVX5 310 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 A0A1B0GVG6 124 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 MYBPHLA2RUH7 354 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 CCDC154A6NI56 674 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 TMEM233B4DJY2 109 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 E9PAM4 449 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 STX16-NPEPL1H3BU86 382 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 UBXN8O00124 270 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 FBP2O00757 339 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARPC2O15144 300 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 GSTA4O15217 222 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 GPR182O15218 404 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 INPP4BO15327 924 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 CD3EAPO15446 510 aaKnown RBP3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 TBC1D4O60343 1298 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 MAFKO60675 156 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 KERAO60938 352 aa3.33□□□□□ -1.88
HMGN1P18-201ENST00000457642 TULP3O75386 442 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms