RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ZNF75DP51815 510 aa13□□□□□ -0.33
TREX1-203ENST00000456089 PCBP4P57723 403 aaKnown RBP13□□□□□ -0.33
TREX1-203ENST00000456089 YPEL5P62699 121 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ELP6Q0PNE2 266 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ZNF235Q14590 738 aa13□□□□□ -0.33
TREX1-203ENST00000456089 UGP2Q16851 508 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ALG11Q2TAA5 492 aa13□□□□□ -0.33
TREX1-203ENST00000456089 C6orf132Q5T0Z8 1188 aa13□□□□□ -0.33
TREX1-203ENST00000456089 TMCO4Q5TGY1 634 aa13□□□□□ -0.33
TREX1-203ENST00000456089 AFMIDQ63HM1 303 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ENPP7Q6UWV6 458 aa13□□□□□ -0.33
TREX1-203ENST00000456089 SRLQ86TD4 932 aa13□□□□□ -0.33
TREX1-203ENST00000456089 SFTPA2Q8IWL1 248 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
TREX1-203ENST00000456089 PCDH19Q8TAB3 1148 aa13□□□□□ -0.33
TREX1-203ENST00000456089 FUBP1Q96AE4 644 aaKnown RBP13□□□□□ -0.33
TREX1-203ENST00000456089 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ZNF599Q96NL3 588 aa13□□□□□ -0.33
TREX1-203ENST00000456089 UBL7Q96S82 380 aaPredicted RBP13□□□□□ -0.33
TREX1-203ENST00000456089 CCDC3Q9BQI4 270 aa13□□□□□ -0.33
TREX1-203ENST00000456089 APOOQ9BUR5 198 aa13□□□□□ -0.33
TREX1-203ENST00000456089 C1QTNF7Q9BXJ2 289 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ATP13A3Q9H7F0 1226 aa13□□□□□ -0.33
TREX1-203ENST00000456089 ASCL3Q9NQ33 180 aa13□□□□□ -0.33
TREX1-203ENST00000456089 EVA1BQ9NVM1 165 aa13□□□□□ -0.33
TREX1-203ENST00000456089 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
TREX1-203ENST00000456089 SEPT3Q9UH03 358 aa13□□□□□ -0.33
TREX1-203ENST00000456089 RABGEF1Q9UJ41 708 aa13□□□□□ -0.33
TREX1-203ENST00000456089 INTUQ9ULD6 942 aa13□□□□□ -0.33
TREX1-203ENST00000456089 TSPAN11A1L157 253 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 TPP1O14773 563 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 C1QL1O75973 258 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 CTSEP14091 401 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 SERPINA4P29622 427 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 MAGEA1P43355 309 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 LSSP48449 732 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 SCNN1BP51168 640 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 SUOXP51687 545 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 PDX1P52945 283 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 BCL2L1Q07817 233 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 RALGDSQ12967 914 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 MMRN1Q13201 1228 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 LBRQ14739 615 aaKnown RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 ERAP2Q6P179 960 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 RBM44Q6ZP01 1051 aaKnown RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 LRRC49Q8IUZ0 686 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 PELI3Q8N2H9 469 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 ZNF248Q8NDW4 579 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 HCAR2Q8TDS4 363 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 PDXPQ96GD0 296 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 HIC2Q96JB3 615 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 ZNF578Q96N58 590 aaPredicted RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 ZNF641Q96N77 438 aaPredicted RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 TUBGCP5Q96RT8 1024 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 MAK16Q9BXY0 300 aaKnown RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 MRPL40Q9NQ50 206 aaKnown RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 PADI4Q9UM07 663 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 DOLKQ9UPQ8 538 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 ATP8A1Q9Y2Q0 1164 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 ZFC3H1O60293 1989 aaKnown RBP12.99□□□□□ -0.33
TREX1-203ENST00000456089 KALRNO60229 2985 aa12.99□□□□□ -0.33
TREX1-203ENST00000456089 KLK10O43240 276 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 ZIC2O95409 532 aaPredicted RBP12.98□□□□□ -0.33
TREX1-203ENST00000456089 TNNT1P13805 278 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
TREX1-203ENST00000456089 SLC1A1P43005 524 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 CSNK1DP48730 415 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 HK3P52790 923 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 TAS2R40P59535 323 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 SRP54P61011 504 aaKnown RBP12.98□□□□□ -0.33
TREX1-203ENST00000456089 POLR2LP62875 67 aaKnown RBP12.98□□□□□ -0.33
TREX1-203ENST00000456089 NSUN2Q08J23 767 aaKnown RBP eCLIP12.98□□□□□ -0.33
TREX1-203ENST00000456089 DPYSL3Q14195 570 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 NFATC4Q14934 902 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 ANKRD20A8PQ5CZ79 823 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 ARHGAP40Q5TG30 622 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 BRAT1Q6PJG6 821 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 GPR155Q7Z3F1 870 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 B3GNT8Q7Z7M8 397 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 KCNE4Q8WWG9 221 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 GLMNQ92990 594 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 CCDC74AQ96AQ1 378 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 PRR11Q96HE9 360 aaPredicted RBP12.98□□□□□ -0.33
TREX1-203ENST00000456089 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
TREX1-203ENST00000456089 ZNF670Q9BS34 389 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 SUDS3Q9H7L9 328 aaPredicted RBP12.98□□□□□ -0.33
TREX1-203ENST00000456089 ETNK2Q9NVF9 386 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 KLQ9UEF7 1012 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 GPR34Q9UPC5 381 aa12.98□□□□□ -0.33
TREX1-203ENST00000456089 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.97□□□□□ -0.33
TREX1-203ENST00000456089 LRRD1A4D1F6 860 aa12.97□□□□□ -0.33
TREX1-203ENST00000456089 TMEM202A6NGA9 273 aa12.97□□□□□ -0.33
TREX1-203ENST00000456089 GOLGA6L6A8MZA4 724 aa12.97□□□□□ -0.33
TREX1-203ENST00000456089 ATXN7O15265 892 aaPredicted RBP12.97□□□□□ -0.33
TREX1-203ENST00000456089 SPOPO43791 374 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms