RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TSC22D3Q99576 134 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 DNAJC28Q9NX36 388 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 EGFL7Q9UHF1 273 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 ANKRD6Q9Y2G4 727 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 LRCH1Q9Y2L9 728 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 DTNAQ9Y4J8 743 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 SLC30A1Q9Y6M5 507 aa12.01□□□□□ -0.49
SMPD4-213ENST00000454468 MTMR11A4FU01 709 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 TRPC5OSA6NMA1 111 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 PSMD12O00232 456 aaPredicted RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 TRAFD1O14545 582 aaPredicted RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 MAGEC1O60732 1142 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 DNAJA2O60884 412 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 IPO13O94829 963 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 GSRP00390 522 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 RBP1P09455 135 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 GKP32189 559 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 RPL34P49207 117 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 EPGNQ6UW88 154 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 ARMCX6Q7L4S7 300 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 TRIM74Q86UV6 250 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 TRIM73Q86UV7 250 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 MFSD6LQ8IWD5 586 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 ZNF333Q96JL9 665 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 DRC3Q9H069 523 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 TLE6Q9H808 572 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 ANK1P16157 1881 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 UNCXA6NJT0 531 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 C2orf81A6NN90 581 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 M0QZQ0 153 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 AKAP10O43572 662 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 PYGLP06737 847 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 GNAZP19086 355 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 TYMPP19971 482 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 CDKN1CP49918 316 aaPredicted RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 CDKN2DP55273 166 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 POU4F1Q01851 419 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 MBTPS1Q14703 1052 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 VEPH1Q14D04 833 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 PAOXQ6QHF9 649 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 MRPL10Q7Z7H8 261 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 AMIGO2Q86SJ2 522 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 DHDDSQ86SQ9 333 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 OR6Y1Q8NGX8 325 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 OR4L1Q8NH43 312 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 NSUN5Q96P11 429 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 RNF208Q9H0X6 261 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 EBF3Q9H4W6 596 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 S100A14Q9HCY8 104 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 BATF3Q9NR55 127 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 ZNF212Q9UDV6 495 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 ZMYM5Q9UJ78 669 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 TRAF6Q9Y4K3 522 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 WDR90Q96KV7 1748 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 A0A1W2PQ45 241 aaPredicted RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 A0A1W2PQY0 241 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 A8MT66 165 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 ANGPT2O15123 496 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 AOC1P19801 751 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 CAPRIN1Q14444 709 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 POM121L1PQ3SYA9 428 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 PTRHD1Q6GMV3 140 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 RSPO2Q6UXX9 243 aaPredicted RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 RPL10LQ96L21 214 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 IL12RB2Q99665 862 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
SMPD4-213ENST00000454468 COPG1Q9Y678 874 aaKnown RBP12□□□□□ -0.49
SMPD4-213ENST00000454468 PABPN1LA6NDY0 278 aaKnown RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 TMEM114B3SHH9 223 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 MATN2O00339 956 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 RTN3O95197 1032 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 PGM3O95394 542 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 C1RP00736 705 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 MT-ND1P03886 318 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 AQP4P55087 323 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 GNA12Q03113 381 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 HECTD3Q5T447 861 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 TMCO4Q5TGY1 634 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 DENND5AQ6IQ26 1287 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 RANBP10Q6VN20 620 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 PIWIL4Q7Z3Z4 852 aaKnown RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 KBTBD2Q8IY47 623 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 COLGALT2Q8IYK4 626 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 FBXO39Q8N4B4 442 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 PGAP3Q96FM1 320 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 ASIC4Q96FT7 647 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 CAPNS2Q96L46 248 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 PLXNB2O15031 1838 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 ENPP3O14638 875 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 MRASO14807 208 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 TBL1XO60907 577 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 ETS2P15036 469 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 ZNF135P52742 658 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 MRPS35P82673 323 aaKnown RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 TSNQ15631 228 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms