RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PPARGP37231 505 aaPredicted RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 PBX3P40426 434 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 DIO1P49895 249 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 AGTR2P50052 363 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 SUMO2P61956 95 aaKnown RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 TXNL4AP83876 142 aaKnown RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 SHC2P98077 582 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 PSG6Q00889 435 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 ROR1Q01973 937 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 CCDC15Q0P6D6 951 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 TMEM115Q12893 351 aaPredicted RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 FOXF2Q12947 444 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 GAB1Q13480 694 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 ALKBH1Q13686 389 aaKnown RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 PLCB4Q15147 1175 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 RASA2Q15283 850 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 CAVIN4Q5BKX8 364 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 ZNF667Q5HYK9 610 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 BEND3Q5T5X7 828 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 TTI2Q6NXR4 508 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 MTFR2Q6P444 385 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 KYAT3Q6YP21 454 aaKnown RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 ZNF782Q6ZMW2 699 aaPredicted RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 C15orf52Q6ZUT6 534 aaKnown RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 RNF144BQ7Z419 303 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 SCN4BQ8IWT1 228 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 FRMD1Q8N878 549 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 NKAIN3Q8N8D7 197 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 ABHD11Q8NFV4 315 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 GLMPQ8WWB7 406 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 CNOT9Q92600 299 aaKnown RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 SAAL1Q96ER3 474 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 C5orf34Q96MH7 638 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 NPAS1Q99742 590 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 BAG1Q99933 345 aaPredicted RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 EPHX3Q9H6B9 360 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 TMOD2Q9NZR1 351 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 HDAC6Q9UBN7 1215 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 B3GNT3Q9Y2A9 372 aa4.57□□□□□ -1.68
LINC00393-202ENST00000452852 RBBP6Q7Z6E9 1792 aaKnown RBP4.57□□□□□ -1.68
LINC00393-202ENST00000452852 DOCK2Q92608 1830 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 LINC01548A6NM66 108 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 SNAP23O00161 211 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 LDLRAD4O15165 306 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 HNRNPCL1O60812 293 aaKnown RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 CYP4B1P13584 511 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 IL11P20809 199 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 GCH1P30793 250 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 BSGP35613 385 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 GARSP41250 739 aaKnown RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 GYG1P46976 350 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 JAK3P52333 1124 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 RPL7AP62424 266 aaKnown RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 EFNB1P98172 346 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 HOXA4Q00056 320 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 B4GALNT1Q00973 533 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 SRSF4Q08170 494 aaKnown RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 CDC16Q13042 620 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 STK4Q13043 487 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 BYSLQ13895 437 aaKnown RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 IL13RA2Q14627 380 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 ARHGEF6Q15052 776 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 TBC1D25Q3MII6 688 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 FBXO43Q4G163 708 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 ZKSCAN2Q63HK3 967 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 FBXO46Q6PJ61 603 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 PTCHD4Q6ZW05 846 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 BRSK2Q8IWQ3 736 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 CERS5Q8N5B7 392 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 SIRT6Q8N6T7 355 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 PNPLA1Q8N8W4 532 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 C2CD4CQ8TF44 421 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 SCFD2Q8WU76 684 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 KLHL29Q96CT2 875 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 ZBED3Q96IU2 234 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 FEM1CQ96JP0 617 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 PRMT6Q96LA8 375 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 WDFY2Q96P53 400 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 THAP7Q9BT49 309 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 CINPQ9BW66 212 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 TRIM31Q9BZY9 425 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 SMARCAD1Q9H4L7 1026 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 TTC12Q9H892 705 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 PDE7BQ9NP56 450 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 SLC22A11Q9NSA0 550 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 ABHD10Q9NUJ1 306 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 ZNF70Q9UC06 446 aaPredicted RBP4.56□□□□□ -1.68
LINC00393-202ENST00000452852 OSGIN2Q9Y236 505 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 MYH2Q9UKX2 1941 aa4.56□□□□□ -1.68
LINC00393-202ENST00000452852 FAM205AQ6ZU69 1335 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 A0A1W2PQ09 198 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 A0A1W2PQM1 296 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 LIPT2A6NK58 231 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 C3orf70A6NLC5 250 aaPredicted RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 TCP10L2B9ZVM9 353 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 H7C0S8 307 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 IFNL4K9M1U5 179 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 TMPRSS11DO60235 418 aa4.55□□□□□ -1.68
LINC00393-202ENST00000452852 DLDP09622 509 aaKnown RBP4.55□□□□□ -1.68
LINC00393-202ENST00000452852 FPR3P25089 353 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms