RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 LPIN1Q14693 890 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 CLEC6AQ6EIG7 209 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 RETREG3Q86VR2 466 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 CILP2Q8IUL8 1156 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 FAM47BQ8NA70 645 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 TRIM15Q9C019 465 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 SLC25A51Q9H1U9 297 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 OSER1Q9NX31 292 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 TRIM64A6NGJ6 449 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 ZNF701M0R085 212 aaPredicted RBP19.13■□□□□ 0.65
SDCBP-204ENST00000447182 DYNC1LI2O43237 492 aaPredicted RBP19.13■□□□□ 0.65
SDCBP-204ENST00000447182 AKAP10O43572 662 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 PAGE1O75459 146 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 HSD17B1P14061 328 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 NELFEP18615 380 aaKnown RBP19.13■□□□□ 0.65
SDCBP-204ENST00000447182 CLCNKBP51801 687 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 GRB14Q14449 540 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 ISCA2Q86U28 154 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 CAMK1DQ8IU85 385 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 CLYBLQ8N0X4 340 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 MINDY1Q8N5J2 469 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 SNX31Q8N9S9 440 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 SLC39A3Q9BRY0 314 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 FBRSL1Q9HCM7 1045 aaKnown RBP19.13■□□□□ 0.65
SDCBP-204ENST00000447182 NDFIP2Q9NV92 336 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 NDUFAF1Q9Y375 327 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 MIA3Q5JRA6 1907 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 A0A087WXM4 84 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 NME4O00746 187 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 DLGAP1O14490 977 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 SLC7A4O43246 635 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 SUPT7LO94864 414 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 MYL3P08590 195 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 FGF4P08620 206 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 MYF6P23409 242 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 SERPINH1P50454 418 aaKnown RBP19.13■□□□□ 0.65
SDCBP-204ENST00000447182 UNC50Q53HI1 259 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 KDELC2Q7Z4H8 507 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 C3orf58Q8NDZ4 430 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 OR13J1Q8NGT2 312 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 SLC45A3Q96JT2 553 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 C3orf30Q96M34 536 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 ASB2Q96Q27 587 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 MAP10Q9P2G4 905 aa19.13■□□□□ 0.65
SDCBP-204ENST00000447182 A0A0J9YYE9 177 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 HAS3O00219 553 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 NME5P56597 212 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 HERVK_113P63132 956 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 BNIP2Q12982 314 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 SPATS1Q496A3 300 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 FAM171BQ6P995 826 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 TMEM207Q6UWW9 146 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 GPR142Q7Z601 462 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 TNIP2Q8NFZ5 429 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 FCRL2Q96LA5 508 aaPredicted RBP19.12■□□□□ 0.65
SDCBP-204ENST00000447182 RTP3Q9BQQ7 232 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 ERVK-6Q9BXR3 956 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 ALG9Q9H6U8 611 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 AKTIPQ9H8T0 292 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 AGPAT4Q9NRZ5 378 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 LMCD1Q9NZU5 365 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 ATP6AP2A0A1C7CYW4 349 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 PFDN1O60925 122 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 ATP6AP2O75787 350 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 THP07101 528 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 CCR1P32246 355 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 KCNC1P48547 511 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 ILF2Q12905 390 aaKnown RBP19.12■□□□□ 0.65
SDCBP-204ENST00000447182 INPP5AQ14642 412 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 NOMO2Q5JPE7 1267 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 LCN8Q6JVE9 175 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 SPNS2Q8IVW8 549 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 RTL3Q8N8U3 475 aaKnown RBP19.12■□□□□ 0.65
SDCBP-204ENST00000447182 IMP4Q96G21 291 aaKnown RBP19.12■□□□□ 0.65
SDCBP-204ENST00000447182 FEM1CQ96JP0 617 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 MFSD1Q9H3U5 465 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 C8orf4Q9NR00 106 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 FNIP2Q9P278 1114 aa19.12■□□□□ 0.65
SDCBP-204ENST00000447182 DHRS12A0PJE2 317 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 MEIS3P2A8K0S8 358 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 TNPO2O14787 897 aaKnown RBP19.11■□□□□ 0.65
SDCBP-204ENST00000447182 C7P10643 843 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 BDNFP23560 247 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 PSEN2P49810 448 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 CDKN2DP55273 166 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 NUP107P57740 925 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 PCSK7Q16549 785 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 PITRM1Q5JRX3 1037 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 TBCELQ5QJ74 424 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 GPR158Q5T848 1215 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 EPHX4Q8IUS5 362 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.11■□□□□ 0.65
SDCBP-204ENST00000447182 PPP1R14BQ96C90 147 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 CYP2S1Q96SQ9 504 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 SMOC2Q9H3U7 446 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 SMOXQ9NWM0 555 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 ACTR3BQ9P1U1 418 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 GMPR2Q9P2T1 348 aaKnown RBP19.11■□□□□ 0.65
SDCBP-204ENST00000447182 DNAJC15Q9Y5T4 150 aa19.11■□□□□ 0.65
SDCBP-204ENST00000447182 MROH6A6NGR9 719 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms