RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 QKIQ96PU8 341 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 MCCC1Q96RQ3 725 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 RBM15Q96T37 977 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 OSBPL8Q9BZF1 889 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 BRD8Q9H0E9 1235 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 HAUS2Q9NVX0 235 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 UCKL1Q9NWZ5 548 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 ARID1BQ8NFD5 2236 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 NCOR2Q9Y618 2525 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 SPTY2D1-AS1A0A0U1RR47 76 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 APOC4-APOC2K7ER74 178 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 YKT6O15498 198 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 TOP3BO95985 862 aaKnown RBP14.87□□□□□ -0.03
HDAC4-204ENST00000446876 APOC2P02655 101 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 CYP2A6P11509 494 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-204ENST00000446876 CES1P23141 567 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 PTPN7P35236 360 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 HNF1BP35680 557 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 GRK6P43250 576 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 EPHB1P54762 984 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 OTUD4Q01804 1114 aaKnown RBP14.87□□□□□ -0.03
HDAC4-204ENST00000446876 EIF2B5Q13144 721 aaKnown RBP14.87□□□□□ -0.03
HDAC4-204ENST00000446876 NOMO1Q15155 1222 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 RFLNAQ6ZTI6 216 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 USP45Q70EL2 814 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 BZW1Q7L1Q6 419 aaKnown RBP14.87□□□□□ -0.03
HDAC4-204ENST00000446876 KDELC2Q7Z4H8 507 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 HSD11B1LQ7Z5J1 315 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 EID2Q8N6I1 236 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 SPATA22Q8NHS9 363 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 FAM174AQ8TBP5 190 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 ACTL9Q8TC94 416 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 COQ10AQ96MF6 247 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 TSGA10Q9BZW7 698 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 PCDH9Q9HC56 1237 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 LZTFL1Q9NQ48 299 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 KLF15Q9UIH9 416 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 PNMA8BQ9ULN7 279 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-204ENST00000446876 OR1A2Q9Y585 309 aa14.87□□□□□ -0.03
HDAC4-204ENST00000446876 COL5A1P20908 1838 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-204ENST00000446876 A0A0J9YYE9 177 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 CFAP69A5D8W1 941 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 H7C0C1 242 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 KRT86O43790 486 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 MT-CYBP00156 380 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-204ENST00000446876 TRBC1P01850 177 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 CD68P34810 354 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-204ENST00000446876 ETV3P41162 512 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 ATP5OP48047 213 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 THOP1P52888 689 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 FOXC1Q12948 553 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 GALNT3Q14435 633 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 INPP5AQ14642 412 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 AGERQ15109 404 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 PCSK7Q16549 785 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 TEX44Q53QW1 395 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 LRRC66Q68CR7 880 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 PARGQ86W56 976 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 DCP2Q8IU60 420 aaKnown RBP14.86□□□□□ -0.03
HDAC4-204ENST00000446876 RBFAQ8N0V3 343 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 SLC25A45Q8N413 288 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 RNF10Q8N5U6 811 aaKnown RBP14.86□□□□□ -0.03
HDAC4-204ENST00000446876 UBL4BQ8N7F7 174 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 NUS1Q96E22 293 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 SCRN2Q96FV2 425 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 IMP4Q96G21 291 aaKnown RBP14.86□□□□□ -0.03
HDAC4-204ENST00000446876 TEKT5Q96M29 485 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 TCEAL2Q9H3H9 227 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-204ENST00000446876 GLOD4Q9HC38 313 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 UBP1Q9NZI7 540 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 PPIL1Q9Y3C6 166 aa14.86□□□□□ -0.03
HDAC4-204ENST00000446876 CAPN8A6NHC0 703 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 MIF4GDA9UHW6 222 aaKnown RBP14.85□□□□□ -0.03
HDAC4-204ENST00000446876 K7ESM1 405 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 SCAMP1O15126 338 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 FFAR2O15552 330 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 PIAS2O75928 621 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 C1SP09871 688 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 CCDC175P0C221 793 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 ATXN1LP0C7T5 689 aaKnown RBP14.85□□□□□ -0.03
HDAC4-204ENST00000446876 NFKB1P19838 968 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 CA4P22748 312 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 DGKAP23743 735 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 RBL1P28749 1068 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 ARHGEF7Q14155 803 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 TCEA2Q15560 299 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 QPCTQ16769 361 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 INAVAQ3KP66 663 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 KCTD16Q68DU8 428 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 CRTC1Q6UUV9 634 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 Q6ZVL8 140 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 ZNF567Q8N184 647 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 HTR3CQ8WXA8 447 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 HES6Q96HZ4 224 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 TRIB3Q96RU7 358 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 APOOQ9BUR5 198 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 SLC25A51Q9H1U9 297 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 KLHL8Q9P2G9 620 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms