RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 EPHX4Q8IUS5 362 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 CYP4Z2PQ8N1L4 340 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ANKFN1Q8N957 763 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TRPV1Q8NER1 839 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 MRPL45Q9BRJ2 306 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 IKZF3Q9UKT9 509 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 EFCAB6Q5THR3 1501 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 C9JVG2 144 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 EI24O14681 340 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 CPNE3O75131 537 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 BCAS1O75363 584 aaPredicted RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 SERPINB7O75635 380 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 SCIMPQ6UWF3 145 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 CYP4Z1Q86W10 505 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TRNT1Q96Q11 434 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 NPLQ9BXD5 320 aaPredicted RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 RACGAP1Q9H0H5 632 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ASB14A6NK59 587 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 MYF6P23409 242 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 INHBCP55103 352 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 STON2Q8WXE9 905 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 AS3MTQ9HBK9 375 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 B3GNT3Q9Y2A9 372 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TNS3Q68CZ2 1445 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 MYL12BO14950 172 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 STAG3L1P0CL83 205 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TMEM62Q0P6H9 643 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 LSM12Q3MHD2 195 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 FSTL4Q6MZW2 842 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 SLC26A9Q7LBE3 791 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ZNF781Q8N8C0 355 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 DEDD2Q8WXF8 326 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ZSCAN5AQ9BUG6 496 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PHF11Q9UIL8 331 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PTPRMP28827 1452 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 IPO13O94829 963 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 C9P02748 559 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ERCC2P18074 760 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 CLK3P49761 638 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 TPRG1LQ5T0D9 272 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TMCO6Q96DC7 493 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ACAD9Q9H845 621 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PDP1Q9P0J1 537 aaPredicted RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 FAM159BA6NKW6 160 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TULP3O75386 442 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TCF4P15884 667 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 MAP2K4P45985 399 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 RARRES1P49788 294 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 BMXP51813 675 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 RHAGQ02094 409 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PTRHD1Q6GMV3 140 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 FAM131AQ6UXB0 335 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 CACTIN-AS1Q8N1I8 211 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TRMOQ9BU70 441 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PAK6Q9NQU5 681 aaPredicted RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 DMAC2Q9NW81 257 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 DDIT4Q9NX09 232 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PAQR5Q9NXK6 330 aaPredicted RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 ADGRE2Q9UHX3 823 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 AQP12BA6NM10 295 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 DYRK3O43781 588 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 HOXD13P35453 343 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 AQP12AQ8IXF9 295 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 SYTL2Q9HCH5 934 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 VARSP26640 1264 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 RXRBP28702 533 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ANKDD1AQ495B1 522 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 GLYATQ6IB77 296 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TRMT10BQ6PF06 316 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 PTGR2Q8N8N7 351 aaPredicted RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 GOLM1Q8NBJ4 401 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TNFRSF10AO00220 468 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 C7P10643 843 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PRKACAP17612 351 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 MPP1Q00013 466 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TRIM71Q2Q1W2 868 aaKnown RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 FAM131BQ86XD5 332 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 MYLPFQ96A32 169 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 NEK6Q9HC98 313 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 MKL2Q9ULH7 1088 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 TMEM98Q9Y2Y6 226 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 NR3C2P08235 984 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 C11orf88Q6PI97 169 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 CCDC185Q8N715 623 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 CERS2Q96G23 380 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 DPY30Q9C005 99 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 NARFQ9UHQ1 456 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ZNF806P0C7X5 589 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 PPM1FP49593 454 aaPredicted RBP7.89□□□□□ -1.15
SMG1-202ENST00000446231 BTBD8Q5XKL5 378 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 DPP10Q8N608 796 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 OR2T12Q8NG77 320 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 OR52B2Q96RD2 323 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 ANKMY1Q9P2S6 941 aa7.89□□□□□ -1.15
SMG1-202ENST00000446231 HIST1H2AGP0C0S8 130 aaPredicted RBP7.88□□□□□ -1.15
SMG1-202ENST00000446231 HIST1H2ADP20671 130 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 SPATS1Q496A3 300 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 CASP12Q6UXS9 341 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 ASB12Q8WXK4 309 aa7.88□□□□□ -1.15
SMG1-202ENST00000446231 HIST1H2AHQ96KK5 128 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms