RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TCTN3Q6NUS6 607 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 RWDD4Q6NW29 188 aaKnown RBP10.03□□□□□ -0.8
SYN3-204ENST00000441821 FMR1NBQ8N0W7 255 aaPredicted RBP10.03□□□□□ -0.8
SYN3-204ENST00000441821 BMPERQ8N8U9 685 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 GALNT11Q8NCW6 608 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 C18orf8Q96DM3 657 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 CFAP57Q96MR6 1250 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 PRDM8Q9NQV8 689 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 PDP2Q9P2J9 529 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 APEX2Q9UBZ4 518 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 VPS4AQ9UN37 437 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 TP53TG5Q9Y2B4 290 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 KCTD3Q9Y597 815 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 CSMD1Q96PZ7 3565 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 SPTBN1Q01082 2364 aaKnown RBP10.03□□□□□ -0.8
SYN3-204ENST00000441821 CREBBPQ92793 2442 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 ICE1Q9Y2F5 2266 aa10.03□□□□□ -0.8
SYN3-204ENST00000441821 ANKRD17O75179 2603 aaKnown RBP10.03□□□□□ -0.8
SYN3-204ENST00000441821 ANKRD36A6QL64 1941 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 IGHV1OR21-1A0A087WYE8 117 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 BICDL2A1A5D9 508 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 PRSS38A1L453 326 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 EFCAB7A8K855 629 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 PDE2AO00408 941 aaPredicted RBP10.02□□□□□ -0.81
SYN3-204ENST00000441821 RECQL5O94762 991 aaPredicted RBP10.02□□□□□ -0.81
SYN3-204ENST00000441821 PIGNO95427 931 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 SLC9A1P19634 815 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 TCN2P20062 427 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 BMP6P22004 513 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 MPSTP25325 297 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 CDH5P33151 784 aaPredicted RBP10.02□□□□□ -0.81
SYN3-204ENST00000441821 MAN1A1P33908 653 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 ADRA1BP35368 520 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 CLCN1P35523 988 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 NKAIN2Q5VXU1 208 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 TMEM71Q6P5X7 295 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 BRAT1Q6PJG6 821 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 ARCQ7LC44 396 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 TIPARPQ7Z3E1 657 aaKnown RBP10.02□□□□□ -0.81
SYN3-204ENST00000441821 SLC47A2Q86VL8 602 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 HEATR4Q86WZ0 1026 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 FAM129CQ86XR2 697 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 XYLT1Q86Y38 959 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 DNAAF5Q86Y56 855 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 NRROSQ86YC3 692 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 NRSN1Q8IZ57 195 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 UNC5BQ8IZJ1 945 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 NETO2Q8NC67 525 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 TMEM35BQ8NCS4 154 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 STARD8Q92502 1023 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 RTP4Q96DX8 246 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 ZNF641Q96N77 438 aaPredicted RBP10.02□□□□□ -0.81
SYN3-204ENST00000441821 NCAPGQ9BPX3 1015 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 ZPBPQ9BS86 351 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 CRACR2AQ9BSW2 395 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 LGR4Q9BXB1 951 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 GSDMCQ9BYG8 508 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 TRIT1Q9H3H1 467 aaKnown RBP10.02□□□□□ -0.81
SYN3-204ENST00000441821 PLCB1Q9NQ66 1216 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 LMBRD1Q9NUN5 540 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
SYN3-204ENST00000441821 TAAR2Q9P1P5 351 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 MOSPD1Q9UJG1 213 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 TMEM59LQ9UK28 342 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 NEU3Q9UQ49 428 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 ATP8A1Q9Y2Q0 1164 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 KCNMB2Q9Y691 235 aa10.02□□□□□ -0.81
SYN3-204ENST00000441821 FAM72CH0Y354 149 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 MKRN2OSH3BPM6 223 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 K7EM74 188 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 PPM1DO15297 605 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 LRIG2O94898 1065 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 NR1D1P20393 614 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 GNLYP22749 145 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 CSF2RBP32927 897 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 COPB1P53618 953 aaKnown RBP10.01□□□□□ -0.81
SYN3-204ENST00000441821 GPLD1P80108 840 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 MC2RQ01718 297 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 ILF3Q12906 894 aaKnown RBP eCLIP10.01□□□□□ -0.81
SYN3-204ENST00000441821 BIRC2Q13490 618 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 PEX6Q13608 980 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 RAPGEF1Q13905 1077 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 CYTH1Q15438 398 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 CFAP58Q5T655 872 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 FAM72AQ5TYM5 149 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 KLHL10Q6JEL2 608 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 FAM72DQ6L9T8 149 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 PNCKQ6P2M8 343 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 CEACAM20Q6UY09 585 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 ASB18Q6ZVZ8 466 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 KDELC2Q7Z4H8 507 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 FAM72BQ86X60 149 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 ZNF354CQ86Y25 554 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 CCDC13Q8IYE1 715 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 NELFBQ8WX92 580 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 TBC1D31Q96DN5 1066 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 EXOC2Q96KP1 924 aa10.01□□□□□ -0.81
SYN3-204ENST00000441821 NOL6Q9H6R4 1146 aaKnown RBP10.01□□□□□ -0.81
SYN3-204ENST00000441821 WDR26Q9H7D7 661 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms