RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 TMEM168Q9H0V1 697 aa20.03■□□□□ 0.8
UBE2F-215ENST00000441728 PCDHGA4Q9Y5G9 962 aa20.03■□□□□ 0.8
UBE2F-215ENST00000441728 EEF2KO00418 725 aaKnown RBP20.02■□□□□ 0.8
UBE2F-215ENST00000441728 PRAMEF11O60813 436 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 CPNE6O95741 557 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 ALDH4A1P30038 563 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 CSNK1DP48730 415 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 ZFP36L1Q07352 338 aaKnown RBP20.02■□□□□ 0.8
UBE2F-215ENST00000441728 ILF3Q12906 894 aaKnown RBP eCLIP20.02■□□□□ 0.86e-7■□□□□ 9.4
UBE2F-215ENST00000441728 PTP4A2Q12974 167 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 PEX6Q13608 980 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 CCDC112Q8NEF3 446 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 GSDMCQ9BYG8 508 aa20.02■□□□□ 0.8
UBE2F-215ENST00000441728 CARS2Q9HA77 564 aaKnown RBP20.02■□□□□ 0.8
UBE2F-215ENST00000441728 PHPT1Q9NRX4 125 aaPredicted RBP20.02■□□□□ 0.8
UBE2F-215ENST00000441728 LRRK1Q38SD2 2015 aa20.02■□□□□ 0.79
UBE2F-215ENST00000441728 ANKRD36A6QL64 1941 aa20.02■□□□□ 0.79
UBE2F-215ENST00000441728 GOLGA6CA6NDK9 693 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 GOLGA6BA6NDN3 693 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 A8MX80 341 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 DFFAO00273 331 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 BUB1BO60566 1050 aaPredicted RBP20.01■□□□□ 0.79
UBE2F-215ENST00000441728 GOLGA6DP0CG33 693 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 ETV5P41161 510 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 PAPOLAP51003 745 aaKnown RBP20.01■□□□□ 0.79
UBE2F-215ENST00000441728 JAM2P57087 298 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 NFKB2Q00653 900 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 HLTFQ14527 1009 aaKnown RBP eCLIP20.01■□□□□ 0.79
UBE2F-215ENST00000441728 LIPIQ6XZB0 460 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 NYAP1Q6ZVC0 841 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 TSEN2Q8NCE0 465 aaKnown RBP20.01■□□□□ 0.79
UBE2F-215ENST00000441728 PCDHB18PQ96TA0 734 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 DHX35Q9H5Z1 703 aaKnown RBP20.01■□□□□ 0.79
UBE2F-215ENST00000441728 PDFQ9HBH1 243 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 RDH14Q9HBH5 336 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 GOLGA6AQ9NYA3 693 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 FOXJ2Q9P0K8 574 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 AP4E1Q9UPM8 1137 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 LRP4O75096 1905 aa20.01■□□□□ 0.79
UBE2F-215ENST00000441728 UNC13CQ8NB66 2214 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 PRSS38A1L453 326 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 STMND1H3BQB6 276 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 HOXC4P09017 264 aaPredicted RBP20■□□□□ 0.79
UBE2F-215ENST00000441728 CCDC172P0C7W6 258 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 SCNN1BP51168 640 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 RENBPP51606 427 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 RFTN1Q14699 578 aaPredicted RBP20■□□□□ 0.79
UBE2F-215ENST00000441728 DENND2CQ68D51 928 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 DPPA4Q7L190 304 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 ZSWIM9Q86XI8 627 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 ZDHHC1Q8WTX9 485 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 JPH3Q8WXH2 748 aaPredicted RBP20■□□□□ 0.79
UBE2F-215ENST00000441728 NUS1Q96E22 293 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 SLC39A8Q9C0K1 460 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 SEMA6CQ9H3T2 930 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 LRRC19Q9H756 370 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 STARD5Q9NSY2 213 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 KCTD5Q9NXV2 234 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 TENM4Q6N022 2769 aa20■□□□□ 0.79
UBE2F-215ENST00000441728 EIF3CLB5ME19 914 aaKnown RBP19.99■□□□□ 0.79
UBE2F-215ENST00000441728 RPL7AP62424 266 aaKnown RBP19.99■□□□□ 0.79
UBE2F-215ENST00000441728 RALGDSQ12967 914 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 KRT31Q15323 416 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 TBR1Q16650 682 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 KCTD16Q68DU8 428 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 PNCKQ6P2M8 343 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 MON1BQ7L1V2 547 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 SLITRK4Q8IW52 837 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 IL22RA1Q8N6P7 574 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 CCL4L1Q8NHW4 92 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 PDCD6IPQ8WUM4 868 aaKnown RBP19.99■□□□□ 0.79
UBE2F-215ENST00000441728 EIF3CQ99613 913 aaKnown RBP19.99■□□□□ 0.79
UBE2F-215ENST00000441728 AGPAT1Q99943 283 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 GPATCH2LQ9NWQ4 482 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 SEPT3Q9UH03 358 aa19.99■□□□□ 0.79
UBE2F-215ENST00000441728 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.98■□□□□ 0.79
UBE2F-215ENST00000441728 A0A1W2PQ67 120 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 C9orf172C9J069 976 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 MYCLP1P12525 358 aaPredicted RBP19.98■□□□□ 0.79
UBE2F-215ENST00000441728 CCNB1P14635 433 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 PSMA2P25787 234 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 RGRP47804 291 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 MAZP56270 477 aaKnown RBP19.98■□□□□ 0.79
UBE2F-215ENST00000441728 OR1D5P58170 312 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 AP1S1P61966 158 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 ZNF235Q14590 738 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 C16orf72Q14CZ0 275 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 CLPPQ16740 277 aaPredicted RBP19.98■□□□□ 0.79
UBE2F-215ENST00000441728 AFMIDQ63HM1 303 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 ENOX1Q8TC92 643 aaKnown RBP19.98■□□□□ 0.79
UBE2F-215ENST00000441728 SEMA3CQ99985 751 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 B3GNT4Q9C0J1 378 aa19.98■□□□□ 0.79
UBE2F-215ENST00000441728 MYO18BQ8IUG5 2567 aa19.97■□□□□ 0.79
UBE2F-215ENST00000441728 SCN8AQ9UQD0 1980 aa19.97■□□□□ 0.79
UBE2F-215ENST00000441728 HGSO14964 777 aaPredicted RBP19.97■□□□□ 0.79
UBE2F-215ENST00000441728 EPHB6O15197 1021 aa19.97■□□□□ 0.79
UBE2F-215ENST00000441728 RNF8O76064 485 aa19.97■□□□□ 0.79
UBE2F-215ENST00000441728 CSTF2P33240 577 aaKnown RBP eCLIP19.97■□□□□ 0.79
UBE2F-215ENST00000441728 TRIM23P36406 574 aa19.97■□□□□ 0.79
UBE2F-215ENST00000441728 GNPDA1P46926 289 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms