RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SLC14A2Q15849 920 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MYLK3Q32MK0 819 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 BBS9Q3SYG4 887 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MAP9Q49MG5 647 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ACCSLQ4AC99 568 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 CARD16Q5EG05 197 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 RALGPS1Q5JS13 557 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 HP1BP3Q5SSJ5 553 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF468Q5VIY5 522 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 NAPEPLDQ6IQ20 393 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 FSTL4Q6MZW2 842 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PPP1R21Q6ZMI0 780 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 DPY19L3Q6ZPD9 716 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 CENPUQ71F23 418 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 CCDC25Q86WR0 208 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 RALGPS2Q86X27 583 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 CAMK1DQ8IU85 385 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PDIK1LQ8N165 341 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MPP5Q8N3R9 675 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PCDH20Q8N6Y1 951 aaKnown RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 CHST14Q8NCH0 376 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 OR2AP1Q8NGE2 309 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 OR6K2Q8NGY2 324 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 GATAD2BQ8WXI9 593 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PTPRN2Q92932 1015 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 FEM1CQ96JP0 617 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 SIGLEC10Q96LC7 697 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ACOX2Q99424 681 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 TBL1YQ9BQ87 522 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 TDRD1Q9BXT4 1180 aaKnown RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 FRMD8Q9BZ67 464 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 TSPYL1Q9H0U9 437 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MIR1-1HGQ9H1L0 117 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 EPB41L4BQ9H329 900 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 TMEM245Q9H330 911 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 SEMA4AQ9H3S1 761 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 C8orf33Q9H7E9 229 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PLAC1Q9HBJ0 212 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ARNT2Q9HBZ2 717 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 XAB2Q9HCS7 855 aaKnown RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 SAYSD1Q9NPB0 183 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 HAUS2Q9NVX0 235 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF446Q9NWS9 450 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 DNAJB12Q9NXW2 375 aaKnown RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 THAP10Q9P2Z0 257 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 EVLQ9UI08 416 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PLA2G4CQ9UP65 541 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 STARD13Q9Y3M8 1113 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 RAI2Q9Y5P3 530 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PIAS3Q9Y6X2 628 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 DENND4CQ5VZ89 1909 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 NUP210Q8TEM1 1887 aaPredicted RBP7.09□□□□□ -1.28
LSM3P3-201ENST00000436601 PDE4DIPQ5VU43 2346 aa7.09□□□□□ -1.28
LSM3P3-201ENST00000436601 DOCK6Q96HP0 2047 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 CDH23Q9H251 3354 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 HELZP42694 1942 aaKnown RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 GOLGA6CA6NDK9 693 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 GOLGA6BA6NDN3 693 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SDR42E2A6NKP2 422 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 WASH3PC4AMC7 463 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 TRAFD1O14545 582 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 EIF3HO15372 352 aaKnown RBP eCLIP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 HTRA2O43464 458 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 PIGNO95427 931 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 POP4O95707 220 aaKnown RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 IGSF6O95976 241 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 B3GALT4O96024 378 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 EGFP01133 1207 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 PDHA1P08559 390 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 GOLGA6DP0CG33 693 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 HLA-EP13747 358 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 HNRNPLP14866 589 aaKnown RBP eCLIP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 GLULP15104 373 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 NME2P22392 152 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 PRKCHP24723 683 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 MGAT1P26572 445 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 HSD17B3P37058 310 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 NNMTP40261 264 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ELK3P41970 407 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 IL12RB1P42701 662 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 TNFRSF4P43489 277 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 KIR2DL1P43626 348 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 NPY2RP49146 381 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 CCNHP51946 323 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 PMS2P54278 862 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SESN2P58004 480 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ST8SIA6P61647 398 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SNRPD1P62314 119 aaKnown RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 CRADDP78560 199 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SARNPP82979 210 aaKnown RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 PFKPQ01813 784 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 ENPP2Q13822 863 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SLMAPQ14BN4 828 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 LRRC14Q15048 493 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 PON2Q15165 354 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 SLC1A5Q15758 541 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 UAP1Q16222 522 aaPredicted RBP7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 KYNUQ16719 465 aa7.08□□□□□ -1.28
LSM3P3-201ENST00000436601 HNRNPA1L2Q32P51 320 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms