RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 OR4D10Q8NGI6 311 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 TMC2Q8TDI7 906 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 JDP2Q8WYK2 163 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 YIPF5Q969M3 257 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 TRIM43Q96BQ3 446 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 GMCL1Q96IK5 515 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 KLHL32Q96NJ5 620 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 IARS2Q9NSE4 1012 aaKnown RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ZNF624Q9P2J8 865 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 DNMT3BQ9UBC3 853 aaKnown RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 GGA1Q9UJY5 639 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ARID2Q68CP9 1835 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 HEATR9A2RTY3 570 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ZNF487B1APH4 448 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 CHURC1-FNTBB4DL54 471 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 NUPL2O15504 423 aaKnown RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ITGAVP06756 1048 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 PRKAR1AP10644 381 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ARL4CP56559 192 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 GTF2BQ00403 316 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 CCNIQ14094 377 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ZNF267Q14586 743 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 XKRXQ6PP77 449 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ZNF438Q7Z4V0 828 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ZER1Q7Z7L7 766 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 KIF18BQ86Y91 864 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 RAB2BQ8WUD1 216 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 DCAKDQ8WVC6 231 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 STON2Q8WXE9 905 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 PDXPQ96GD0 296 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 PRR11Q96HE9 360 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 VCPIP1Q96JH7 1222 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 FAM118BQ9BPY3 351 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 LXNQ9BS40 222 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ZNF416Q9BWM5 594 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 TEKT3Q9BXF9 490 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 SAV1Q9H4B6 383 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 NCOR1P1Q9H4R4 102 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 ACOXLQ9NUZ1 547 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 WRAP73Q9P2S5 460 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-205ENST00000435213 SLC17A7Q9P2U7 560 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 DNPEPQ9ULA0 475 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 UBR3Q6ZT12 1888 aa7.36□□□□□ -1.23
GARNL3-205ENST00000435213 SYNJ2BP-COX16A0A087WUM0 186 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 CCDC163A0A0D9SF12 145 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 I3L521 148 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 PSMD9O00233 223 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 PLOD2O00469 737 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 SYNCRIPO60506 623 aaKnown RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 LPXNO60711 386 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 RPS6KA4O75676 772 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 NR3C2P08235 984 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 LTA4HP09960 611 aaKnown RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 MYL2P10916 166 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 GLRA2P23416 452 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 HOXA6P31267 233 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 ETV4P43268 484 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 DGKQP52824 942 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 EIF3EP60228 445 aaKnown RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 BST2Q10589 180 aaKnown RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 ILF2Q12905 390 aaKnown RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 SLC6A19Q695T7 634 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 PADI6Q6TGC4 694 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 B3GNT9Q6UX72 402 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 TMEM26Q6ZUK4 368 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 AMIGO1Q86WK6 493 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 CPNE9Q8IYJ1 553 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 ZNF512Q96ME7 567 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 SLITRK1Q96PX8 696 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 CRLF2Q9HC73 371 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 RAB20Q9NX57 234 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 MED16Q9Y2X0 877 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 FARP1Q9Y4F1 1045 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 A0A1B0GTQ1 180 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 TISP43B9A030 160 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 E7ESA3 106 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 ALOX12P18054 663 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 CD58P19256 250 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 IL12RB1P42701 662 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 PRIM2P49643 509 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 EPHB1P54762 984 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 ALDH6A1Q02252 535 aaKnown RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 SLC18A2Q05940 514 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 AOC3Q16853 763 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 RUNDC3AQ59EK9 446 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 CIAPIN1Q6FI81 312 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 SHQ1Q6PI26 577 aaKnown RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 MIB1Q86YT6 1006 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 CCDC185Q8N715 623 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 GLIS1Q8NBF1 620 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 OR6F1Q8NGZ6 308 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 RAET1EQ8TD07 263 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 HTRA1Q92743 480 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 UPF1Q92900 1129 aaKnown RBP eCLIP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 TINAGL1Q9GZM7 467 aaPredicted RBP7.35□□□□□ -1.23
GARNL3-205ENST00000435213 ING3Q9NXR8 418 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 PCDH10Q9P2E7 1040 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 A0A0G2JMP0 313 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 A0A0X1KG70 313 aa7.35□□□□□ -1.23
GARNL3-205ENST00000435213 DENND3A2RUS2 1198 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms