RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PDP2Q9P2J9 529 aa18.64■□□□□ 0.58
CLK1-205ENST00000434813 PACSIN3Q9UKS6 424 aa18.64■□□□□ 0.58
CLK1-205ENST00000434813 OR51F1A6NGY5 319 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 EPOP01588 193 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 HMBSP08397 361 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 UBTFL6P0CB48 400 aaPredicted RBP18.64■□□□□ 0.57
CLK1-205ENST00000434813 HSPA8P11142 646 aaKnown RBP18.64■□□□□ 0.57
CLK1-205ENST00000434813 FDXRP22570 491 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 FGFR3P22607 806 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 DPP6P42658 865 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 LBX1P52954 281 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 PLK1P53350 603 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 SQLEQ14534 574 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 ZNF235Q14590 738 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 LRRC36Q1X8D7 754 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 GPR158Q5T848 1215 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 ALG1LQ6GMV1 187 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 NADSYN1Q6IA69 706 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 SPNS2Q8IVW8 549 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 PQLC1Q8N2U9 271 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 PNPLA1Q8N8W4 532 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 GPR150Q8NGU9 434 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 L3HYPDHQ96EM0 354 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 ZNF599Q96NL3 588 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 UTP6Q9NYH9 597 aaKnown RBP18.64■□□□□ 0.57
CLK1-205ENST00000434813 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLK1-205ENST00000434813 ASB3Q9Y575 518 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 KCTD3Q9Y597 815 aa18.64■□□□□ 0.57
CLK1-205ENST00000434813 MUSKO15146 869 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 ZDHHC11BP0C7U3 371 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 IMPDH1P20839 514 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 AQP4P55087 323 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 GPR17Q13304 367 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 MAPRE2Q15555 327 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 ZFP1Q6P2D0 407 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 ISCA2Q86U28 154 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 MYEOVQ96EZ4 313 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 TBATAQ96M53 351 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 SEPT5Q99719 369 aaPredicted RBP18.63■□□□□ 0.57
CLK1-205ENST00000434813 GPR62Q9BZJ7 368 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 CRISPLD1Q9H336 500 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 ALG9Q9H6U8 611 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 RIMKLBQ9ULI2 386 aa18.63■□□□□ 0.57
CLK1-205ENST00000434813 GLP2RO95838 553 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 UQCRBP14927 111 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 TACR2P21452 398 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 ME2P23368 584 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 SUOXP51687 545 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 KPNA1P52294 538 aaPredicted RBP18.62■□□□□ 0.57
CLK1-205ENST00000434813 ARPP19P56211 112 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 MGAT5BQ3V5L5 792 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 PIM3Q86V86 326 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 TMEM126BQ8IUX1 230 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 DLG3Q92796 817 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 PHF21BQ96EK2 531 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 B3GALT6Q96L58 329 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 POPDC3Q9HBV1 291 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 SLC27A5Q9Y2P5 690 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 FIS1Q9Y3D6 152 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 CFLARO15519 480 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 GJB3O75712 270 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 RPP40O75818 363 aaKnown RBP18.62■□□□□ 0.57
CLK1-205ENST00000434813 VNN2O95498 520 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 GOT2P00505 430 aaKnown RBP18.62■□□□□ 0.57
CLK1-205ENST00000434813 OGNP20774 298 aaKnown RBP18.62■□□□□ 0.57
CLK1-205ENST00000434813 PKNOX1P55347 436 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 SMARCB1Q12824 385 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 C5orf22Q49AR2 442 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 ZNF678Q5SXM1 525 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 MRNIPQ6NTE8 343 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 GK5Q6ZS86 529 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 FAM126BQ8IXS8 530 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 HMGCLL1Q8TB92 370 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 BLOC1S5Q8TDH9 187 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 DNAJC1Q96KC8 554 aaKnown RBP18.62■□□□□ 0.57
CLK1-205ENST00000434813 DEFB118Q96PH6 123 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 BTBD9Q96Q07 612 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 NPAS2Q99743 824 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 YIPF3Q9GZM5 350 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 ELAC1Q9H777 363 aaKnown RBP18.62■□□□□ 0.57
CLK1-205ENST00000434813 CCSER2Q9H7U1 834 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 SPATS2LQ9NUQ6 558 aaKnown RBP18.62■□□□□ 0.57
CLK1-205ENST00000434813 MARCH5Q9NX47 278 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 CHD5Q8TDI0 1954 aa18.62■□□□□ 0.57
CLK1-205ENST00000434813 CD3EAPO15446 510 aaKnown RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 TLR5O60602 858 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 RNASEH1O60930 286 aaKnown RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 BCAS2O75934 225 aaPredicted RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 CD1DP15813 335 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 PTK2BQ14289 1009 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 ZNF549Q6P9A3 640 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 RPS27LQ71UM5 84 aaKnown RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 ABI1Q8IZP0 508 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 BRSK1Q8TDC3 778 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 USP13Q92995 863 aaPredicted RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 PTERQ96BW5 349 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 MRPL1Q9BYD6 325 aaKnown RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 CRYL1Q9Y2S2 319 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 ARL5AQ9Y689 179 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 F5H5T6 163 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms