RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SCNN1BP51168 640 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 TSR1Q2NL82 804 aaKnown RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 PPP6R3Q5H9R7 873 aaPredicted RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 CERCAMQ5T4B2 595 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 CCDC183Q5T5S1 534 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 OGFOD3Q6PK18 319 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 CCDC81Q6ZN84 652 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 CYP4V2Q6ZWL3 525 aaPredicted RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 RAB11FIP2Q7L804 512 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 CCNJLQ8IV13 435 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 AOPEPQ8N6M6 819 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 PLA2G15Q8NCC3 412 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 TTC9Q92623 222 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 FUBP1Q96AE4 644 aaKnown RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 TMEM159Q96B96 161 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 LRRN3Q9H3W5 708 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 WDR26Q9H7D7 661 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 FGF22Q9HCT0 170 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 PMS2P1A4D2B8 440 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 TMEM202A6NGA9 273 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 CASC3O15234 703 aaKnown RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 LRCH4O75427 683 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 MYBL1P10243 752 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 PCK1P35558 622 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 PRKCIP41743 596 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 CCL7P80098 99 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 CLN3Q13286 438 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 DPYSQ14117 519 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 ZNF235Q14590 738 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 LBRQ14739 615 aaKnown RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 TCEA2Q15560 299 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 ASIC2Q16515 512 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 TAF8Q7Z7C8 310 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 B3GNT8Q7Z7M8 397 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 FBXO39Q8N4B4 442 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 KIAA1524Q8TCG1 905 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 OR1E3Q8WZA6 343 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 CCNL2Q96S94 520 aaPredicted RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 HAUS4Q9H6D7 363 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 MRPL47Q9HD33 250 aaKnown RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 AIPL1Q9NZN9 384 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 CWC15Q9P013 229 aaKnown RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 CNOT8Q9UFF9 292 aaKnown RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 ATXN7L1Q9ULK2 861 aaPredicted RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 ARHGEF17Q96PE2 2063 aaPredicted RBP14.94□□□□□ -0.02
MSH5-208ENST00000429846 AHCTF1Q8WYP5 2266 aa14.94□□□□□ -0.02
MSH5-208ENST00000429846 PRSS38A1L453 326 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 H3BRJ5 948 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 HTRA2O43464 458 aaPredicted RBP14.93□□□□□ -0.02
MSH5-208ENST00000429846 NUDT21O43809 227 aaKnown RBP14.93□□□□□ -0.02
MSH5-208ENST00000429846 NOBOXO60393 691 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 MYCLP1P12525 358 aaPredicted RBP14.93□□□□□ -0.02
MSH5-208ENST00000429846 UGT1A5P35504 534 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 ARL4AP40617 200 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 TYRO3Q06418 890 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 DPYSL2Q16555 572 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 FILIP1LQ4L180 1135 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 C14orf28Q4W4Y0 310 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 RALGPS1Q5JS13 557 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 KCTD16Q68DU8 428 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 PNCKQ6P2M8 343 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 ARHGAP36Q6ZRI8 547 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 BBS5Q8N3I7 341 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 FAM46DQ8NEK8 389 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 ZNF653Q96CK0 615 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 NUS1Q96E22 293 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 BPIFA3Q9BQP9 254 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 FOXP3Q9BZS1 431 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
MSH5-208ENST00000429846 ATMQ13315 3056 aa14.93□□□□□ -0.02
MSH5-208ENST00000429846 A0A1W2PQC6 194 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 PSMD11O00231 422 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 NVLO15381 856 aaKnown RBP14.92□□□□□ -0.02
MSH5-208ENST00000429846 TEX33O43247 280 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 FTLP02792 175 aaPredicted RBP14.92□□□□□ -0.02
MSH5-208ENST00000429846 JMJD7P0C870 316 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 GM2AP17900 193 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 SLC5A2P31639 672 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 SERPINB6P35237 376 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 KLHL30Q0D2K2 578 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 SLC10A7Q0GE19 358 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 HLTFQ14527 1009 aaKnown RBP eCLIP14.92□□□□□ -0.02
MSH5-208ENST00000429846 ACOX1Q15067 660 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 ZSCAN23Q3MJ62 389 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 SPECC1LQ69YQ0 1117 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 TMCO3Q6UWJ1 677 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 NYAP1Q6ZVC0 841 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 ZNF571Q7Z3V5 609 aaPredicted RBP14.92□□□□□ -0.02
MSH5-208ENST00000429846 SPRED1Q7Z699 444 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 COQ10AQ96MF6 247 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 NUDCD1Q96RS6 583 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
MSH5-208ENST00000429846 TRIM7Q9C029 511 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 TMEM168Q9H0V1 697 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 DPEP2Q9H4A9 486 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 CYP4F12Q9HCS2 524 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 MRPL40Q9NQ50 206 aaKnown RBP14.92□□□□□ -0.02
MSH5-208ENST00000429846 PHPT1Q9NRX4 125 aaPredicted RBP14.92□□□□□ -0.02
MSH5-208ENST00000429846 LRIT1Q9P2V4 623 aa14.92□□□□□ -0.02
MSH5-208ENST00000429846 B4GALT6Q9UBX8 382 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms