RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GNGT2O14610 69 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 DCLK1O15075 740 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 RHOBTB1O94844 696 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 TBX18O95935 607 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 HLA-DQB2P05538 268 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 HNRNPCP07910 306 aaKnown RBP eCLIP8.09□□□□□ -1.11
HPS4-205ENST00000429411 SLC35E2BP0CK96 405 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 ITGB6P18564 788 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 MAGEA3P43357 314 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 RPL5P46777 297 aaKnown RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 PPIDQ08752 370 aaKnown RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 TUBB3Q13509 450 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 MAPRE2Q15555 327 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 ZIK1Q3SY52 487 aaPredicted RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 TIGD5Q53EQ6 642 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 RAP1GAP2Q684P5 730 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 STEAP4Q687X5 459 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 DHFR2Q86XF0 187 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 SPPL2CQ8IUH8 684 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CLVS1Q8IUQ0 354 aaPredicted RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 PLPP6Q8IY26 295 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CFAP52Q8N1V2 620 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 FAM47BQ8NA70 645 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 SLAIN1Q8ND83 568 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 SHCBP1Q8NEM2 672 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CDC26Q8NHZ8 85 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 DHRS1Q96LJ7 313 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 TBATAQ96M53 351 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 NFKBIZQ9BYH8 718 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CNGB3Q9NQW8 809 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 FAM105AQ9NUU6 356 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 SLC38A7Q9NVC3 462 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 UXTQ9UBK9 157 aaPredicted RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 WARS2Q9UGM6 360 aaKnown RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 TTC3P53804 2025 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 DNAJC25-GNG10A0A024R161 153 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 ZBBXA8MT70 800 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 H2AFYO75367 372 aaKnown RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 ALDH1A2O94788 518 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 SNRPB2P08579 225 aaKnown RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 ODC1P11926 461 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 PCNAP12004 261 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CHRM3P20309 590 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 IL10P22301 178 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CD52P31358 61 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 NEDD8Q15843 81 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 PSMD5Q16401 504 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 MGAT5BQ3V5L5 792 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 TMEM135Q86UB9 458 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 OFCC1Q8IZS5 231 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 PGAM4Q8N0Y7 254 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 PCYOX1LQ8NBM8 494 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 TSPAN14Q8NG11 270 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CCDC90BQ9GZT6 254 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 ING2Q9H160 280 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 ADNPQ9H2P0 1102 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 CASS4Q9NQ75 786 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 EIF2B3Q9NR50 452 aaKnown RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 RCOR3Q9P2K3 495 aaPredicted RBP8.09□□□□□ -1.11
HPS4-205ENST00000429411 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 TRAF6Q9Y4K3 522 aa8.09□□□□□ -1.11
HPS4-205ENST00000429411 A0A1B0GTW7 788 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 F8W810 466 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 SLCO1B7G3V0H7 640 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 H3BSA7 217 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 TRIM38O00635 465 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 STRNO43815 780 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 FOXD2O60548 495 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 SNX2O60749 519 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 KATNA1O75449 491 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 GSRP00390 522 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ATP5BP06576 529 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 LTA4HP09960 611 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 NCK1P16333 377 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ZNF23P17027 643 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 TPP2P29144 1249 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 FMO4P31512 558 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 GJA8P48165 433 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 SERPINH1P50454 418 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 SCNN1BP51168 640 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 GALK1P51570 392 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ECT2LQ008S8 904 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 NFYCQ13952 458 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 ADGRE1Q14246 886 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 PAFAH1B3Q15102 231 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 KIAA0319Q5VV43 1072 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 PIWIL4Q7Z3Z4 852 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 APLFQ8IW19 511 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 TOP6BLQ8N6T0 577 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 CENPIQ92674 756 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 PLEKHG4BQ96PX9 1271 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 KCNA7Q96RP8 456 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 MIOSQ9NXC5 875 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 PRPF19Q9UMS4 504 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 RBBP6Q7Z6E9 1792 aaKnown RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 E5RI56 91 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 I6L893 689 aaPredicted RBP8.08□□□□□ -1.12
HPS4-205ENST00000429411 J3KR12 359 aa8.08□□□□□ -1.12
HPS4-205ENST00000429411 IRF1P10914 325 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms