RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SEPT9Q9UHD8 586 aaPredicted RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 A0A1W2PP18 115 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 SAC3D1A6NKF1 404 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 BBIP1A8MTZ0 92 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 E9PQ18 207 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TNNI1P19237 187 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 HTR1BP28222 390 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 GRIA4P48058 902 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ECT2LQ008S8 904 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 GLRA4Q5JXX5 417 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TUBA3EQ6PEY2 450 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ZBTB33Q86T24 672 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 VSIG10LQ86VR7 867 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 GRAMD2AQ8IUY3 354 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 LYSMD2Q8IV50 215 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ZCCHC7Q8N3Z6 543 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 POP5Q969H6 163 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 ISG20Q96AZ6 181 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 PGBD4Q96DM1 585 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CLIP3Q96DZ5 547 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 MUS81Q96NY9 551 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CGRRF1Q99675 332 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 KLHL25Q9H0H3 589 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 MMP27Q9H306 513 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NTN4Q9HB63 628 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 HPS4Q9NQG7 708 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 VPS51Q9UID3 782 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 PRELID1Q9Y255 219 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 PCDHA9Q9Y5H5 950 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 PCDHA10Q9Y5I2 948 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 LRRIQ4A6NIV6 560 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NAMPTP43490 491 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 FKBP1AP62942 108 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 TRAF2Q12933 501 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NPTX1Q15818 432 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 PRMT9Q6P2P2 845 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 SH3BP5LQ7L8J4 393 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CCDC117Q8IWD4 279 aaPredicted RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 CLEC4FQ8N1N0 589 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 KCTD6Q8NC69 237 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 GRPEL2Q8TAA5 225 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ZC3H15Q8WU90 426 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 CHURC1Q8WUH1 139 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CCDC126Q96EE4 140 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 FAM213AQ9BRX8 229 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ZFP14Q9HCL3 533 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NPAP1Q9NZP6 1156 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 HACD1B0YJ81 288 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 FKBP9O95302 570 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CCNE2O96020 404 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 MPOP05164 745 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 HOXB6P17509 224 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 C1QTNF8P60827 252 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 YWHAEP62258 255 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 ZNF33AQ06730 810 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 SEMA3BQ13214 749 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 BEND5Q7L4P6 421 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 XYLT1Q86Y38 959 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 KIAA2013Q8IYS2 634 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 FSTL5Q8N475 847 aaPredicted RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 OR6Q1Q8NGQ2 317 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 SLC22A17Q8WUG5 538 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 IL22Q9GZX6 179 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 PORCNQ9H237 461 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 KMT5AQ9NQR1 393 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ADA2Q9NZK5 511 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CCDC167Q9P0B6 97 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 USP3Q9Y6I4 520 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NRCAMQ92823 1304 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 DLX3O60479 287 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 CFBP00751 764 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 BMP4P12644 408 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 GRK3P35626 688 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 JAK3P52333 1124 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 SHROOM1Q2M3G4 852 aaPredicted RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 ADPRMQ3LIE5 342 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 FAAH2Q6GMR7 532 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 CDC42EP5Q6NZY7 148 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 DENND1BQ6P3S1 775 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 BNIPLQ7Z465 357 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 R3HCC1LQ7Z5L2 792 aaKnown RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 ADAM32Q8TC27 787 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 BPIFB1Q8TDL5 484 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 IL12RB2Q99665 862 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 NPAS2Q99743 824 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TMEM134Q9H6X4 195 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 DIABLOQ9NR28 239 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 ASNSD1Q9NWL6 643 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TRPC5OSA6NMA1 111 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 SHOXO15266 292 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 ENO2P09104 434 aaPredicted RBP5.15□□□□□ -1.58
RIF1-203ENST00000428287 NUDT1P36639 197 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 ALDH3A2P51648 485 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 TUBA1BP68363 451 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 PRAMEP78395 509 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 CDK10Q15131 360 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 SPANXN3Q5MJ09 141 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 ZFYVE27Q5T4F4 411 aa5.15□□□□□ -1.58
RIF1-203ENST00000428287 PRR23BQ6ZRT6 265 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms