RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ARRDC2Q8TBH0 407 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 KIAA1524Q8TCG1 905 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 ERLEC1Q96DZ1 483 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 FERMT1Q9BQL6 677 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 TDRD1Q9BXT4 1180 aaKnown RBP9.18□□□□□ -0.94
SMC1A-203ENST00000428014 NOD2Q9HC29 1040 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 RAD18Q9NS91 495 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 TRHDEQ9UKU6 1024 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 MSRB2Q9Y3D2 182 aa9.18□□□□□ -0.94
SMC1A-203ENST00000428014 hCG_1818297A0A087WSY0 165 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 A0A0J9YYE9 177 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 GPR89AB7ZAQ6 455 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 PLK4O00444 970 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 WNT9AO14904 365 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 NRDCO43847 1150 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 HEXIM1O94992 359 aaKnown RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 TRBC1P01850 177 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 ELFN1P0C7U0 828 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 GPR89BP0CG08 455 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 C6P13671 934 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 CKMT2P17540 419 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 DGKAP23743 735 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 MAT2AP31153 395 aaKnown RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 GKP32189 559 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 VIPR1P32241 457 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 NOP2P46087 812 aaKnown RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 LIG3P49916 1009 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 DUSP3P51452 185 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SIM1P81133 766 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 GBE1Q04446 702 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SLC10A2Q12908 348 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 FZD2Q14332 565 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 PRKD1Q15139 912 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SMAD1Q15797 465 aaKnown RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 HS1BP3Q53T59 392 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 PDPK2PQ6A1A2 396 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SPOCD1Q6ZMY3 1216 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 DAAM2Q86T65 1068 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 TMPRSS12Q86WS5 348 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 KLHDC8BQ8IXV7 354 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SLC22A18ASQ8N1D0 253 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 PGBD5Q8N414 524 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 OR13H1Q8NG92 308 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 OR6K2Q8NGY2 324 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 PIH1D2Q8WWB5 315 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 HAUS1Q96CS2 278 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 IMP4Q96G21 291 aaKnown RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 TEKT5Q96M29 485 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 COQ10AQ96MF6 247 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 ADGRE3Q9BY15 652 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 FRMD8P1Q9BZ68 369 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SLC25A51Q9H1U9 297 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 IL21RQ9HBE5 538 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 RBM22Q9NW64 420 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 TOR4AQ9NXH8 423 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SPASTQ9UBP0 616 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 FTSJ1Q9UET6 329 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 SHROOM3Q8TF72 1996 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 TMEM131Q92545 1883 aa9.17□□□□□ -0.94
SMC1A-203ENST00000428014 POM121BA6NF01 834 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 CAPN8A6NHC0 703 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 SOWAHDA6NJG2 315 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 LMO7DNF2Z398 122 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 KRT86O43790 486 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 PPFIA2O75334 1257 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 RECQL5O94762 991 aaPredicted RBP9.16□□□□□ -0.94
SMC1A-203ENST00000428014 PIGNO95427 931 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 CPP00450 1065 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 PRLP01236 227 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 KRT1P04264 644 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 ALPIP09923 528 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 CKMT1AP12532 417 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 PRLRP16471 622 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 IGFALSP35858 605 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 THOP1P52888 689 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 RWDD2BP57060 319 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 DCDC1P59894 354 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 TRAF2Q12933 501 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 NFATC4Q14934 902 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 CLPPQ16740 277 aaPredicted RBP9.16□□□□□ -0.94
SMC1A-203ENST00000428014 WSCD2Q2TBF2 565 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 POM121L1PQ3SYA9 428 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 ZDHHC20Q5W0Z9 365 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 ZCCHC8Q6NZY4 707 aaKnown RBP9.16□□□□□ -0.94
SMC1A-203ENST00000428014 MFSD7Q6UXD7 560 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 RAD9BQ6WBX8 426 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 TMPRSS7Q7RTY8 843 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 TECPR1Q7Z6L1 1165 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 ZSWIM9Q86XI8 627 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 TP53INP2Q8IXH6 220 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 TFB1MQ8WVM0 346 aaKnown RBP9.16□□□□□ -0.94
SMC1A-203ENST00000428014 P3H4Q92791 437 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 DTD2Q96FN9 168 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 SCARF2Q96GP6 870 aaPredicted RBP9.16□□□□□ -0.94
SMC1A-203ENST00000428014 EXOC2Q96KP1 924 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 SEMA3CQ99985 751 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 TRABDQ9H4I3 376 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms