RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 KIR2DL1P43626 348 aaPredicted RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 ABCG1P45844 678 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 TDGQ13569 410 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 BMPR2Q13873 1038 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 FRG1Q14331 258 aaKnown RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 ELAVL3Q14576 367 aaKnown RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 PUS10Q3MIT2 529 aaKnown RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 HSP90AA5PQ58FG0 334 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 TMEM196Q5HYL7 178 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 AGBL2Q5U5Z8 902 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 PDPK2PQ6A1A2 396 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 USP45Q70EL2 814 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 PARS2Q7L3T8 475 aaKnown RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 TSPAN33Q86UF1 283 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 CYP4X1Q8N118 509 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 RIBC1Q8N443 379 aaPredicted RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 OR4K2Q8NGD2 314 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 PIP4K2CQ8TBX8 421 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 BRSK1Q8TDC3 778 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 CDKL2Q92772 493 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 ARRDC3Q96B67 414 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 ATP6V1G3Q96LB4 118 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 AGAP2Q99490 1192 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 GPR63Q9BZJ6 419 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 FAM53CQ9NYF3 392 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 HACD3Q9P035 362 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 SLC24A2Q9UI40 661 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 SARDHQ9UL12 918 aa12.1□□□□□ -0.47
RFC4-206ENST00000427785 NOVA2Q9UNW9 492 aaKnown RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 FNDC3AQ9Y2H6 1198 aaKnown RBP12.1□□□□□ -0.47
RFC4-206ENST00000427785 KLF8O95600 359 aaPredicted RBP12.09□□□□□ -0.47
RFC4-206ENST00000427785 PRNPP04156 253 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 HNRNPLP14866 589 aaKnown RBP eCLIP12.09□□□□□ -0.47
RFC4-206ENST00000427785 LPOP22079 712 aaPredicted RBP12.09□□□□□ -0.47
RFC4-206ENST00000427785 LHCGRP22888 699 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 HNF1BP35680 557 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 SLC1A2P43004 574 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 TNFRSF4P43489 277 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 ARCN1P48444 511 aaKnown RBP12.09□□□□□ -0.47
RFC4-206ENST00000427785 PRAMEP78395 509 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 MPP1Q00013 466 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 PFKPQ01813 784 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 NAB1Q13506 487 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 LAMB3Q13751 1172 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 C2orf27AQ580R0 203 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 ZNF805Q5CZA5 627 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 ARMC3Q5W041 872 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 ZNF470Q6ECI4 717 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 BRAT1Q6PJG6 821 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 PACS1Q6VY07 963 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 NLRP9Q7RTR0 991 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 MTERF4Q7Z6M4 381 aaKnown RBP12.09□□□□□ -0.47
RFC4-206ENST00000427785 CROCCP2Q86T23 111 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 TDRPQ86YL5 185 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 STYXQ8WUJ0 223 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 HDAC10Q969S8 669 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 TBATAQ96M53 351 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 MCCC1Q96RQ3 725 aaPredicted RBP12.09□□□□□ -0.47
RFC4-206ENST00000427785 FAM167BQ9BTA0 163 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 SUDS3Q9H7L9 328 aaPredicted RBP12.09□□□□□ -0.47
RFC4-206ENST00000427785 PPCSQ9HAB8 311 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 BPIFA1Q9NP55 256 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 PRSS16Q9NQE7 514 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 SLC2A4RGQ9NR83 387 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 NLE1Q9NVX2 485 aaPredicted RBP12.09□□□□□ -0.47
RFC4-206ENST00000427785 B4GALT6Q9UBX8 382 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 FKBPLQ9UIM3 349 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 CA14Q9ULX7 337 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 PHTF1Q9UMS5 762 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 ITM2BQ9Y287 266 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 IKBKGQ9Y6K9 419 aa12.09□□□□□ -0.47
RFC4-206ENST00000427785 CCDC162PA2VCL2 907 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 SHISA7A6NL88 538 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 C2orf81A6NN90 581 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 C16orf96A6NNT2 1141 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 HMGB1P1B2RPK0 211 aaPredicted RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 STX7O15400 261 aaKnown RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 CLDN7O95471 211 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 GOT2P00505 430 aaKnown RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 IL1BP01584 269 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 C1SP09871 688 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 PRSS56P0CW18 603 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 CD72P21854 359 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 XPAP23025 273 aaPredicted RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 MAGOHP61326 146 aaKnown RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 PPARDQ03181 441 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 ACVR1Q04771 509 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 ZP2Q05996 745 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 GRSF1Q12849 480 aaKnown RBP eCLIP12.08□□□□□ -0.48
RFC4-206ENST00000427785 THOC5Q13769 683 aaKnown RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 ENPP2Q13822 863 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 MLF2Q15773 248 aaPredicted RBP12.08□□□□□ -0.48
RFC4-206ENST00000427785 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
RFC4-206ENST00000427785 LRRC66Q68CR7 880 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms