RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 PIMREGQ9BSJ6 248 aa6.64□□□□□ -1.35
HMGB1P32-201ENST00000425971 C1QTNF1Q9BXJ1 281 aa6.64□□□□□ -1.35
HMGB1P32-201ENST00000425971 HEMGNQ9BXL5 484 aa6.64□□□□□ -1.35
HMGB1P32-201ENST00000425971 SNTG1Q9NSN8 517 aa6.64□□□□□ -1.35
HMGB1P32-201ENST00000425971 KIAA1456Q9P272 454 aa6.64□□□□□ -1.35
HMGB1P32-201ENST00000425971 RAB3GAP2Q9H2M9 1393 aa6.64□□□□□ -1.35
HMGB1P32-201ENST00000425971 USP34Q70CQ2 3546 aa6.64□□□□□ -1.35
HMGB1P32-201ENST00000425971 C5orf42Q9H799 3197 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 XIRP2A4UGR9 3374 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 CBY3A6NI87 242 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 LRRC3CA6NJW4 275 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 IGLV2-14P01704 120 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 LCKP06239 509 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 LAMB1P07942 1786 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 TAF1P21675 1872 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 HOXD13P35453 343 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 CPOXP36551 454 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 CYP4A11Q02928 519 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 FHL2Q14192 279 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 TMEM119Q4V9L6 283 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 EARS2Q5JPH6 523 aaKnown RBP6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 TMEM268Q5VZI3 342 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 CDC73Q6P1J9 531 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 LRIG3Q6UXM1 1119 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 MOB3CQ70IA8 216 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 WDR5BQ86VZ2 330 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 UBR2Q8IWV8 1755 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 CCDC89Q8N998 374 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 SEMA6DQ8NFY4 1073 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 TMEM170AQ8WVE7 144 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 USP6NLQ92738 828 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 HIPK3Q9H422 1215 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 ZNF304Q9HCX3 659 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 CLIC5Q9NZA1 410 aa6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 IPO11Q9UI26 975 aaKnown RBP6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 ING1Q9UK53 422 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P32-201ENST00000425971 ARHGAP10A1A4S6 786 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 GTPBP1O00178 669 aaKnown RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 TAF4O00268 1085 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 SPARCP09486 303 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 CCL5P13501 91 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 ALOX12P18054 663 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 ARSFP54793 590 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 ME3Q16798 604 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 PLEKHO1Q53GL0 409 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 SERTAD4-AS1Q5TG53 156 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 DBX2Q6ZNG2 339 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 CCDC129Q6ZRS4 1044 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 CYB5R4Q7L1T6 521 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 SLC46A3Q7Z3Q1 461 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 CADM4Q8NFZ8 388 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 WIPF2Q8TF74 440 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 SNRNP27Q8WVK2 155 aaKnown RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 NSUN4Q96CB9 384 aaKnown RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 CLMNQ96JQ2 1002 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 AGAP2Q99490 1192 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 PCED1AQ9H1Q7 454 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 VPS33BQ9H267 617 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 ACTR5Q9H9F9 607 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 EIF2B3Q9NR50 452 aaKnown RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 LIMA1Q9UHB6 759 aaKnown RBP6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 VPS28Q9UK41 221 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 RPS6KL1Q9Y6S9 549 aa6.62□□□□□ -1.35
HMGB1P32-201ENST00000425971 DUOX1Q9NRD9 1551 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 MANSC4A6NHS7 340 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 STARD3NLO95772 234 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 LATS1O95835 1130 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 HEXAP06865 529 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 FOSL2P15408 326 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 KLRC2P26717 231 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 ZXDAP98168 799 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 TMEM115Q12893 351 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 ZNF268Q14587 947 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 EDRF1Q3B7T1 1238 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 SYTL3Q4VX76 610 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 C1orf141Q5JVX7 400 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 ATG9BQ674R7 924 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 TXNDC8Q6A555 127 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 KLHL24Q6TFL4 600 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 TRIM74Q86UV6 250 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 TRIM73Q86UV7 250 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 CCDC25Q86WR0 208 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 HASPINQ8TF76 798 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 U2AF1L4Q8WU68 220 aaKnown RBP6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 SERINC2Q96SA4 455 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 SCPEP1Q9HB40 452 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 SMYD2Q9NRG4 433 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 SEPT11Q9NVA2 429 aaKnown RBP6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 HAUS2Q9NVX0 235 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 NCKIPSDQ9NZQ3 722 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 SLCO3A1Q9UIG8 710 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 CDH22Q9UJ99 828 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 KIF20BQ96Q89 1820 aa6.61□□□□□ -1.35
HMGB1P32-201ENST00000425971 RTL9Q8NET4 1388 aa6.6□□□□□ -1.35
HMGB1P32-201ENST00000425971 KIF7Q2M1P5 1343 aa6.6□□□□□ -1.35
HMGB1P32-201ENST00000425971 TRBV5-7A0A0A0MS05 114 aa6.6□□□□□ -1.35
HMGB1P32-201ENST00000425971 LIPT2A6NK58 231 aa6.6□□□□□ -1.35
HMGB1P32-201ENST00000425971 AHCYL1O43865 530 aa6.6□□□□□ -1.35
HMGB1P32-201ENST00000425971 CPA2P48052 419 aa6.6□□□□□ -1.35
HMGB1P32-201ENST00000425971 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms